RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 OR56B4Q8NH76 319 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR9G1Q8NH87 305 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 CAPSLQ8WWF8 208 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 TOMM40LQ969M1 308 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 ARL11Q969Q4 196 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 RPEQ96AT9 228 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 CNBD2Q96M20 576 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 Q96M66 194 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 SLC25A33Q9BSK2 321 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 ANKRD60Q9BZ19 345 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 PRSS22Q9GZN4 317 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 MMP28Q9H239 520 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 NCOR1P1Q9H4R4 102 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 DUSP21Q9H596 190 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 LINC00574Q9H8X3 128 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 ETAA1Q9NY74 926 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 RCC2Q9P258 522 aaKnown RBP4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 PITPNC1Q9UKF7 332 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 TPRKBQ9Y3C4 175 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 PEX16Q9Y5Y5 336 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGHV3-72A0A0B4J1Y9 119 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 A0A1W2PPI3 338 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 C12orf77C9JDV5 145 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 MCRIP1C9JLW8 97 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 SDCBPO00560 298 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 SLC31A2O15432 143 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 SC5DO75845 299 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 ATP6V1G2O95670 118 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 AMY1AP04745 511 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 AMY2AP04746 511 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 SNRNP70P08621 437 aaKnown RBP4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 CSF1P09603 554 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 UCHL1P09936 223 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 RCC1P18754 421 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 FUT3P21217 361 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 CRHBPP24387 322 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 BRS3P32247 399 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 CEACAM3P40198 252 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 VDAC2P45880 294 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 REG1BP48304 166 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 PAX5Q02548 391 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 MADCAM1Q13477 382 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 GPR176Q14439 515 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 HNF4GQ14541 408 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 P2RY14Q15391 338 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 C2orf68Q2NKX9 166 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 ABCA11PQ4W5N1 156 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 HSD17B12Q53GQ0 312 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 C9orf152Q5JTZ5 239 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 C1orf100Q5SVJ3 147 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 SYT6Q5T7P8 510 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 C10orf99Q6UWK7 81 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 TMEM91Q6ZNR0 172 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 LINC00596Q86U02 117 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 C1QL4Q86Z23 238 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 CDH26Q8IXH8 852 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 PRR18Q8N4B5 295 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 MS4A15Q8N5U1 240 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 DRAM1Q8N682 238 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 NKAIN3Q8N8D7 197 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR10V1Q8NGI7 309 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR1L1Q8NH94 360 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 CFHR4Q92496 578 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 UFD1Q92890 307 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 GFI1Q99684 422 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 CITED2Q99967 270 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 NICN1Q9BSH3 213 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 MMP27Q9H306 513 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 PCDHB16Q9NRJ7 776 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 GFOD1Q9NXC2 390 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 TRAPPC2LQ9UL33 140 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 AMMECR1Q9Y4X0 333 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 PLXNB1O43157 2135 aa4.6□□□□□ -1.67
HMGB1P20-201ENST00000402555 PRKDCP78527 4128 aaKnown RBP4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 A0A0A6YYD4 124 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 A0A1W2PRX2 142 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A10PA6NDY2 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A20PA6NIJ5 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A7PA6NKC0 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A12PA8MX19 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A23PA8MXZ1 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 OOSP1A8MZH6 123 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 HSD17B6O14756 317 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 ORC5O43913 435 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 PDCD6O75340 191 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 PEX14O75381 377 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FBXO24O75426 580 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR2F2O95006 317 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGKV1D-33P01593 117 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGKV1-33P01594 117 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 HBZP02008 142 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 LPLP06858 475 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A13PP0C7W8 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A24PP0C7X0 464 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms