RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SNAPINO95295 136 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 IL3RAP26951 378 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 HFEQ30201 348 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 STRAPQ9Y3F4 350 aaKnown RBP12.01□□□□□ -0.49
SCAF4-202ENST00000399804 PUS1Q9Y606 427 aaKnown RBP eCLIP12.01□□□□□ -0.49
SCAF4-202ENST00000399804 A0A0A6YYD4 124 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 SS18L1O75177 396 aaPredicted RBP12.01□□□□□ -0.49
SCAF4-202ENST00000399804 HBE1P02100 147 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 NAAAQ02083 359 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 C2orf68Q2NKX9 166 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 NSUN5P2Q63ZY6 315 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 PRR7Q8TB68 274 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 MYOZ1Q9NP98 299 aaPredicted RBP12.01□□□□□ -0.49
SCAF4-202ENST00000399804 A0A1W2PPH5 198 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 J3QW42 95 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 OR2A4O95047 310 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 RRASP10301 218 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 TUBG1P23258 451 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 PPP1CCP36873 323 aaKnown RBP12□□□□□ -0.49
SCAF4-202ENST00000399804 SOHLH1Q5JUK2 328 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 OR2A7Q96R45 310 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 LDLRAD4O15165 306 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 OR8U8P0C7N1 319 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 OTX1P32242 354 aaPredicted RBP12□□□□□ -0.49
SCAF4-202ENST00000399804 IL24Q13007 206 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 ZNF674Q2M3X9 581 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 TRAT1Q6PIZ9 186 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 MRPL41Q8IXM3 137 aaKnown RBP12□□□□□ -0.49
SCAF4-202ENST00000399804 OR5C1Q8NGR4 320 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 USB1Q9BQ65 265 aaKnown RBP12□□□□□ -0.49
SCAF4-202ENST00000399804 ZDHHC11Q9H8X9 412 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 TNFSF18Q9UNG2 199 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 PCNX3Q9H6A9 2034 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 E9PLN8 166 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 DKK1O94907 266 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 IL18BPO95998 194 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 RTL8BQ17RB0 113 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 DTX1Q86Y01 620 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 MRGPRFQ96AM1 343 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 MOB3AQ96BX8 217 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 TUBG2Q9NRH3 451 aa12□□□□□ -0.49
SCAF4-202ENST00000399804 FREM1Q5H8C1 2179 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 TRAV38-1A0A0B4J264 116 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 hADV38S2A0JD32 116 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 WNT9BO14905 357 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 MT-CO2P00403 227 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 TIMM23BQ5SRD1 257 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 FAM122CQ6P4D5 195 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 LCN15Q6UWW0 184 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 Q9N2K0 584 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 NTF4P34130 210 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 RPL35P42766 123 aaKnown RBP11.99□□□□□ -0.49
SCAF4-202ENST00000399804 IGFBP7Q16270 282 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 FAM89BQ8N5H3 189 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 MSI2Q96DH6 328 aaKnown RBP11.99□□□□□ -0.49
SCAF4-202ENST00000399804 OR10C1Q96KK4 312 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 USF3Q68DE3 2245 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 CHST1O43916 411 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 MPV17P39210 176 aa11.99□□□□□ -0.49
SCAF4-202ENST00000399804 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
SCAF4-202ENST00000399804 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 ZFP92A6NM28 416 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 C17orf112F2Z3M2 114 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 METTL15P1P0C7V9 234 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 LGALS4P56470 323 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 HGFACQ04756 655 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 ZNF529Q6P280 563 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 RNF138Q8WVD3 245 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 MS4A5Q9H3V2 200 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 GCM1Q9NP62 436 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 ASCL3Q9NQ33 180 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 CACNA1AO00555 2505 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 MED19A0JLT2 244 aaPredicted RBP11.98□□□□□ -0.49
SCAF4-202ENST00000399804 PQLC2LA1A4F0 135 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 CD37P11049 281 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 PSG2P11465 335 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 HIST1H3AP68431 136 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 TMEM267Q0VDI3 215 aaPredicted RBP11.98□□□□□ -0.49
SCAF4-202ENST00000399804 HES1Q14469 280 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 TESK1Q15569 626 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 HIST2H3PS2Q5TEC6 136 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 HIST2H3AQ71DI3 136 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 SPACA3Q8IXA5 215 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 C1orf162Q8NEQ5 155 aaPredicted RBP11.98□□□□□ -0.49
SCAF4-202ENST00000399804 CIB3Q96Q77 187 aaPredicted RBP11.98□□□□□ -0.49
SCAF4-202ENST00000399804 RAB40CQ96S21 281 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 OR5AC2Q9NZP5 309 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 CDS2O95674 445 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 F2RP25116 425 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 FOXL2NBQ6ZUU3 175 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 PIP4P1Q86T03 277 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 OR52L2PQ8NGH6 319 aa11.98□□□□□ -0.49
SCAF4-202ENST00000399804 ST8SIA5O15466 376 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 HBZP02008 142 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 SLC25A4P12235 298 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 WNT5AP41221 380 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 KIR2DL2P43627 348 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms