RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GLB1P16278 677 aa11.96□□□□□ -0.49
APOB-202ENST00000399256 CASP6P55212 293 aa11.96□□□□□ -0.49
APOB-202ENST00000399256 NXPH1P58417 271 aa11.96□□□□□ -0.49
APOB-202ENST00000399256 PSG4Q00888 419 aa11.96□□□□□ -0.49
APOB-202ENST00000399256 RTP5Q14D33 572 aa11.96□□□□□ -0.49
APOB-202ENST00000399256 RPUSD4Q96CM3 377 aaKnown RBP11.96□□□□□ -0.49
APOB-202ENST00000399256 ELOVL1Q9BW60 279 aa11.96□□□□□ -0.49
APOB-202ENST00000399256 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
APOB-202ENST00000399256 A0A0J9YW62 118 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 MAP1LC3B2A6NCE7 125 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 H0Y980 276 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 HMGB3O15347 200 aaKnown RBP11.96□□□□□ -0.5
APOB-202ENST00000399256 VAMP5O95183 116 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.5
APOB-202ENST00000399256 PSG2P11465 335 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 FKBP2P26885 142 aaKnown RBP11.96□□□□□ -0.5
APOB-202ENST00000399256 MBD3L1Q8WWY6 194 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 RAB24Q969Q5 203 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 NEU1Q99519 415 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 MAP1LC3BQ9GZQ8 125 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 SEMA5BQ9P283 1151 aa11.96□□□□□ -0.5
APOB-202ENST00000399256 ZNF816-ZNF321PA0A0X1KG74 233 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 TP53I11O14683 189 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 PFN1P07737 140 aaKnown RBP11.95□□□□□ -0.5
APOB-202ENST00000399256 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
APOB-202ENST00000399256 Q6ZRM9 215 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 UBALD2Q8IYN6 164 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 AKIRIN1Q9H9L7 192 aaPredicted RBP11.95□□□□□ -0.5
APOB-202ENST00000399256 TMEM38BQ9NVV0 291 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 NAT8Q9UHE5 227 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 PRSS50Q9UI38 385 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 OR6C6A6NF89 314 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 ZNF737O75373 536 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 CST2P09228 141 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 CCL3P10147 92 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 SPINK2P20155 84 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 GALR1P47211 349 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 KMT5CQ86Y97 462 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 ZNF525Q8N782 197 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 TMEM37Q8WXS4 190 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 P2RX4Q99571 388 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 PCGF1Q9BSM1 259 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 CABIN1Q9Y6J0 2220 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 ADAMTS20P59510 1910 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 IFNL4K9M1U5 179 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 OR4A8P0C604 315 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 IDH3GP51553 393 aaPredicted RBP11.95□□□□□ -0.5
APOB-202ENST00000399256 NUTF2P61970 127 aaKnown RBP11.95□□□□□ -0.5
APOB-202ENST00000399256 ABLIM2Q6H8Q1 611 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 SLC25A45Q8N413 288 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 OR1K1Q8NGR3 316 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 WFIKKN1Q96NZ8 548 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 WNT5BQ9H1J7 359 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
APOB-202ENST00000399256 A0A1W2PPQ1 181 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 KIAA1324LA8MWY0 1029 aaPredicted RBP11.94□□□□□ -0.5
APOB-202ENST00000399256 TUSC2O75896 110 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 NAPSAO96009 420 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 SERPINE2P07093 398 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 EDN3P14138 238 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 F2RP25116 425 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 G0S2P27469 103 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 PMS2P11Q13670 270 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 SLC10A1Q14973 349 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 PRSS8Q16651 343 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 TMEM241Q24JQ0 296 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 HAPLN4Q86UW8 402 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 CLDN23Q96B33 292 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 MRPL37Q9BZE1 423 aaKnown RBP11.94□□□□□ -0.5
APOB-202ENST00000399256 PSENENQ9NZ42 101 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 LRRC3CA6NJW4 275 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 H7BYZ3 331 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 ZIC3O60481 467 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 MMP7P09237 267 aaPredicted RBP11.94□□□□□ -0.5
APOB-202ENST00000399256 CEACAM6P40199 344 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 TESK1Q15569 626 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 BSXQ3C1V8 233 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
APOB-202ENST00000399256 DNASE2BQ8WZ79 361 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 RAB40CQ96S21 281 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 CRIM1Q9NZV1 1036 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 FUT9Q9Y231 359 aa11.94□□□□□ -0.5
APOB-202ENST00000399256 SDK2Q58EX2 2172 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 C3orf80F5H4A9 247 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 IFNA1P01562 189 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 CYB5R2Q6BCY4 276 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 WDR74Q6RFH5 385 aaPredicted RBP11.93□□□□□ -0.5
APOB-202ENST00000399256 SPEM1Q8N4L4 309 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 LHX4Q969G2 390 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 OR2H1Q9GZK4 316 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 RPL23P62829 140 aaKnown RBP11.93□□□□□ -0.5
APOB-202ENST00000399256 TMEM41BQ5BJD5 291 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 TCEAL6Q6IPX3 200 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 KIAA2026Q5HYC2 2103 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 SYNGR2O43760 224 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms