RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 PRR18Q8N4B5 295 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.77□□□□□ -0.37
MBD1-207ENST00000398488 RAB3CQ96E17 227 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 TAF9BQ9HBM6 251 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 PSG11Q9UQ72 335 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 A0A075B6Q4 140 aa12.76□□□□□ -0.37
MBD1-207ENST00000398488 F2RL2O00254 374 aa12.76□□□□□ -0.37
MBD1-207ENST00000398488 GNMTQ14749 295 aa12.76□□□□□ -0.37
MBD1-207ENST00000398488 PLA1AQ53H76 456 aa12.76□□□□□ -0.37
MBD1-207ENST00000398488 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
MBD1-207ENST00000398488 SLC25A46Q96AG3 418 aa12.76□□□□□ -0.37
MBD1-207ENST00000398488 DNHD1Q96M86 4753 aa12.76□□□□□ -0.37
MBD1-207ENST00000398488 H3BUI4 141 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 SLC31A2O15432 143 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 FBP1P09467 338 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 RPL5P46777 297 aaKnown RBP12.75□□□□□ -0.37
MBD1-207ENST00000398488 GNG10P50151 68 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 RAB13P51153 203 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 SPCS2Q15005 226 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 SSX2Q16385 188 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 OR52W1Q6IF63 320 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 CLVS1Q8IUQ0 354 aaPredicted RBP12.75□□□□□ -0.37
MBD1-207ENST00000398488 DTX3Q8N9I9 347 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 BEND2Q8NDZ0 799 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 OR52L2PQ8NGH6 319 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 OR10V1Q8NGI7 309 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 CHIAQ9BZP6 476 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 MEGF9Q9H1U4 602 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 RHBDL2Q9NX52 303 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 GFOD1Q9NXC2 390 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 HILPDAQ9Y5L2 63 aa12.75□□□□□ -0.37
MBD1-207ENST00000398488 COL6A5A8TX70 2615 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 LY6LH3BQJ8 138 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 SDCBPO00560 298 aaPredicted RBP12.74□□□□□ -0.37
MBD1-207ENST00000398488 HIST1H1DP16402 221 aaKnown RBP12.74□□□□□ -0.37
MBD1-207ENST00000398488 ZNF134P52741 427 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 LGALS4P56470 323 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 HMGN3Q15651 99 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 HLA-DRB5Q30154 266 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 FBLN7Q53RD9 439 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 C6orf183Q5T699 404 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 IZUMO1Q8IYV9 350 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 OR10A7Q8NGE5 316 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 SETD6Q8TBK2 473 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 CMSS1Q9BQ75 279 aaKnown RBP12.74□□□□□ -0.37
MBD1-207ENST00000398488 CHMP1AQ9HD42 196 aaPredicted RBP12.74□□□□□ -0.37
MBD1-207ENST00000398488 Q9N2K0 584 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 SPATA2Q9UM82 520 aa12.74□□□□□ -0.37
MBD1-207ENST00000398488 TBL2Q9Y4P3 447 aaKnown RBP12.74□□□□□ -0.37
MBD1-207ENST00000398488 METTL21EPA6NDL7 271 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 RNF212BA8MTL3 300 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 CLDN34H7C241 214 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 J3QR06 171 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 RANBP1P43487 201 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 CDNFQ49AH0 187 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 ZNF439Q8NDP4 499 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 OR9G1Q8NH87 305 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 MAFIPQ8WZ33 124 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 JMJD8Q96S16 334 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 SSX3Q99909 188 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 DCSTAMPQ9H295 470 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 ZNF230Q9UIE0 474 aaPredicted RBP12.73□□□□□ -0.37
MBD1-207ENST00000398488 ETV7Q9Y603 341 aa12.73□□□□□ -0.37
MBD1-207ENST00000398488 IGKV1D-8A0A087WSZ0 117 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 IGKV1-6A0A0C4DH72 117 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 BUB1B-PAK6H3BSN5 160 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 RNASE1P07998 156 aaKnown RBP12.72□□□□□ -0.37
MBD1-207ENST00000398488 SCTP09683 121 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 PTHLHP12272 177 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 HTR1DP28221 377 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 ZNF260Q3ZCT1 412 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 OR52M1Q8NGK5 317 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 SSMEM1Q8WWF3 244 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 RBMXL1Q96E39 390 aaKnown RBP12.72□□□□□ -0.37
MBD1-207ENST00000398488 MALSU1Q96EH3 234 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 PARP12Q9H0J9 701 aaKnown RBP12.72□□□□□ -0.37
MBD1-207ENST00000398488 C12orf4Q9NQ89 552 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 H3BUX3 64 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 TRIM77I1YAP6 450 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 TOR1AO14656 332 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 SPINT2O43291 252 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 SSX5O60225 188 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
MBD1-207ENST00000398488 SCAND1P57086 179 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 FAM189A2Q15884 450 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 CT45A1Q5HYN5 189 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 MINOS1Q5TGZ0 78 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 CT45A3Q8NHU0 189 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 ZNF596Q8TC21 504 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 FAM216AQ8WUB2 273 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 MMP28Q9H239 520 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 SCOCQ9UIL1 159 aa12.72□□□□□ -0.37
MBD1-207ENST00000398488 CEPT1Q9Y6K0 416 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms