RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 A0A0J9YW62 118 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 IGSF23A1L1A6 192 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 SYNGR3O43761 229 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 FAM3BP58499 235 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 ACOT6Q3I5F7 207 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 UBALD2Q8IYN6 164 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 CMTM1Q8IZ96 169 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 GPHA2Q96T91 129 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 SRXN1Q9BYN0 137 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 ZNF442Q9H7R0 627 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 FSCN3Q9NQT6 498 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 TRAV1-1A0A0B4J248 108 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 IGHV5-10-1A0A0J9YXX1 117 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 VAMP5O95183 116 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 B4GALT1P15291 398 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 SELEP16581 610 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 IDH3GP51553 393 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 OR5I1Q13606 314 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 PMS2CLQ68D20 193 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 LHFPL2Q6ZUX7 228 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 CCDC71LQ8N9Z2 235 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 OR1F12Q8NHA8 337 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 MIEN1Q9BRT3 115 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 GNG13Q9P2W3 67 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 ZFP30Q9Y2G7 519 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 C3orf85A0A1B0GTC6 90 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 SSSCA1O60232 199 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 ZIC3O60481 467 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 NXPH3O95157 252 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 ZNF32P17041 273 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 MRPS34P82930 218 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 MALLQ13021 153 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 ALKBH3Q96Q83 286 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 PILRBQ9UKJ0 227 aa13.71□□□□□ -0.21
CHMP1A-201ENST00000397901 A0A1W2PPQ1 181 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 OR7C1O76099 320 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 PPYP01298 95 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 CEACAM1P13688 526 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 LIFP15018 202 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 PCOLCEQ15113 449 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 PIGCQ92535 297 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 CCDC74BQ96LY2 380 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 C20orf144Q9BQM9 153 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 OR2J1Q9GZK6 312 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 MPPED1O15442 326 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 PDCD6O75340 191 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 TUBG1P23258 451 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 NTF4P34130 210 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 NKX2-1P43699 371 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 HLA-BQ31612 363 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 SPIN3Q5JUX0 258 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 PLCXD3Q63HM9 321 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 WDR25Q64LD2 544 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 C17orf78Q8N4C9 275 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM171Q8WVE6 324 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 C11orf1Q9H5F2 150 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 PLEKHF2Q9H8W4 249 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF705FA8MVS1 300 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 CD55P08174 381 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF705DP0CH99 300 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF705BP0CI00 300 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 BCL2P10415 239 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 MMP9P14780 707 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 TCN2P20062 427 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 ACTL10Q5JWF8 245 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 COL5A1-AS1Q5SY13 56 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 ASCL4Q6XD76 172 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM37Q8WXS4 190 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 P2RX4Q99571 388 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 OR51B6Q9H340 312 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 PROK2Q9HC23 129 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 OCIAD1Q9NX40 245 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 UBE2J1Q9Y385 318 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 FRYLO94915 3013 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 VPS13AQ96RL7 3174 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 CST7O76096 145 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 TNFSF10P50591 281 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 DSCR4P56555 118 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF92Q03936 586 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 CXorf66Q5JRM2 361 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 C16orf82Q7Z2V1 217 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF100Q8IYN0 542 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 H1FOOQ8IZA3 346 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM217Q8N7C4 229 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 OR5B12Q96R08 314 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 TBX15Q96SF7 602 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 PRDM6Q9NQX0 595 aa13.69□□□□□ -0.22
CHMP1A-201ENST00000397901 TDGF1P13385 188 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 GZMHP20718 246 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 NPBWR2P48146 333 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 UCP3P55916 312 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 ERVS71-1P61550 626 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 PRDX4Q13162 271 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM241Q24JQ0 296 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 SSX7Q7RTT5 188 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 NUFIP2Q7Z417 695 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 TBC1D26Q86UD7 250 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms