RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 FER1L6-AS2Q96M78 137 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TP53TG5Q9Y2B4 290 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 HSD17B6O14756 317 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IFNA10P01566 189 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MBP02144 154 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CA6P23280 308 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 LBHQ53QV2 105 aaPredicted RBP15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 AWAT1Q58HT5 328 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ZFP62Q8NB50 900 aaPredicted RBP15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TMEM222Q9H0R3 208 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SPRR3Q9UBC9 169 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 A0A1W2PR80 420 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SLC22A20A6NK97 555 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ANKRD30BLA7E2S9 258 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 M0R036 132 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 GPR137BO60478 399 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 RHBDL1O75783 438 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IFNA17P01571 189 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FHITP49789 147 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR8G1Q15617 311 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MPV17LQ2QL34 196 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MDP1Q86V88 176 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SUMF2Q8NBJ7 301 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR4D5Q8NGN0 318 aa15.65■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TNFSF12O43508 249 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 CD46P15529 392 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 Q6ZS49 121 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ZNF695Q8IW36 515 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 OR1K1Q8NGR3 316 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 SH3BGRL3Q9H299 93 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 PARP11Q9NR21 331 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 CCL28Q9NRJ3 127 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ARG2P78540 354 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 MYPOPQ86VE0 399 aaPredicted RBP15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 KDF1Q8NAX2 398 aaPredicted RBP15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 POM121Q96HA1 1249 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 WDYHV1Q96HA8 205 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 CACNA1HO95180 2353 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 MED19A0JLT2 244 aaPredicted RBP15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TRDCB7Z8K6 153 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 C1QL1O75973 258 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 P2RY1P47900 373 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 NUTF2P61970 127 aaKnown RBP15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 PMP22Q01453 160 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 IL13RA2Q14627 380 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 HSD17B11Q8NBQ5 300 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ATG101Q9BSB4 218 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 UNKLQ9H9P5 680 aaKnown RBP15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ATP23Q9Y6H3 246 aa15.64■□□□□ 0.09
CHRFAM7A-202ENST00000397827 DSPP15924 2871 aaKnown RBP15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 SLC33A1O00400 549 aaPredicted RBP15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 FBXW9Q5XUX1 488 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 KIRREL1Q96J84 757 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 LOXL4Q96JB6 756 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 SPOCK3Q9BQ16 436 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 MAGT1Q9H0U3 335 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 POMT1Q9Y6A1 747 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TTC28Q96AY4 2481 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TRGV5A0A0B4J1U4 118 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 IGHV3-64DA0A0J9YX35 117 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 NXPH3O95157 252 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 SNRPCP09234 159 aaKnown RBP15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ZNF616Q08AN1 781 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 GNMTQ14749 295 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 GPR157Q5UAW9 335 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 MRPL30Q8TCC3 161 aaKnown RBP15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 BCL2L2Q92843 193 aaPredicted RBP15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TUBA4BQ9H853 241 aa15.63■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TRAV24A0A0B4J272 114 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 FAM24AA6NFZ4 105 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 CD5P06127 495 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 CELA3BP08861 270 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 GNG3P63215 75 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ZNF766Q5HY98 468 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 SELENOHQ8IZQ5 122 aaKnown RBP15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 FAM212BQ9NTI7 297 aaPredicted RBP15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 EP300Q09472 2414 aaPredicted RBP15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 BORCS7-ASMTA0A0B4J1R7 106 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 KIR2DS1A0A191URI9 304 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 KIR2DS4P43632 304 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 KIR2DS1Q14954 304 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 PDZD11Q5EBL8 140 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 CXorf66Q5JRM2 361 aaPredicted RBP15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ZNF573Q86YE8 665 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 FAM185AQ8N0U4 392 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 MALSU1Q96EH3 234 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ARV1Q9H2C2 271 aa15.62■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TRAV39A0A0B4J263 110 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 ADAM20O43506 726 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TUSC2O75896 110 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 NKX2-1P43699 371 aaPredicted RBP15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 MIDNQ504T8 468 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 FAM58AQ8N1B3 248 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TMEM56Q96MV1 263 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 MPC1Q9Y5U8 109 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 TMEM56-RWDD3S4R434 201 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 A0A1W2PPE2 198 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 OMGP23515 440 aa15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 EWSR1Q01844 656 aaKnown RBP eCLIP15.61■□□□□ 0.09
CHRFAM7A-202ENST00000397827 SRSF7Q16629 238 aaKnown RBP eCLIP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms