RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PIGCQ92535 297 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 PLA2G3Q9NZ20 509 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RNF24Q9Y225 148 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF850A8MQ14 1090 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 SFTPBP07988 381 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RRNAD1Q96FB5 475 aaKnown RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 IGHV2OR16-5A0A0B4J2B6 119 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM218A2RU14 115 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 MT-CO2P00403 227 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZP3P21754 424 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 TCEA1P23193 301 aaKnown RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ASCL1P50553 236 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF137PP52743 207 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RAB31Q13636 194 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 TGIF1Q15583 401 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 HIKESHIQ53FT3 197 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RNFT1Q5M7Z0 435 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RGS7BPQ6MZT1 257 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 C1orf122Q6ZSJ8 110 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF2Q9BSG1 426 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 DPCDQ9BVM2 203 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 C19orf24Q9BVV8 132 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF701Q9NV72 531 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 SPRR3Q9UBC9 169 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 PRUNE2Q8WUY3 3088 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF729A6NN14 1252 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 IFNA1P01562 189 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 CECR9P0C854 216 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 IDH3GP51553 393 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 PIGPP57054 158 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF585BQ52M93 769 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 BEX5Q5H9J7 111 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 TEX36Q5VZQ5 186 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 PRSS33Q8NF86 280 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RAB1CQ92928 201 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 TUBA4BQ9H853 241 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 A0A0A6YYD4 124 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 OOSP1A8MZH6 123 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 TXNL1O43396 289 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 ANXA7P20073 488 aaKnown RBP4.97□□□□□ -1.61
PTPRD-206ENST00000397617 GALMQ96C23 342 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 LGALS8O00214 317 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 IGHV1-2P23083 117 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 MAGEB1P43366 347 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM187Q14656 261 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 LPAL2Q16609 132 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 Q6P435 159 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 OR2AE1Q8NHA4 323 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 MTCH1Q9NZJ7 389 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 DYSFO75923 2080 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 DEDDO75618 318 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 P0C879 139 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 CD79AP11912 226 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 MRGPRFQ96AM1 343 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 SRSF8Q9BRL6 282 aaKnown RBP4.97□□□□□ -1.61
PTPRD-206ENST00000397617 LYRM2Q9NU23 88 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-206ENST00000397617 SDHAF2Q9NX18 166 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 FAM215AQ9Y5M1 114 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 SPAARA0A1B0GVQ0 90 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 GDF9O60383 454 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 IFNA10P01566 189 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 ODF4Q2M2E3 257 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM268Q5VZI3 342 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 FAM122CQ6P4D5 195 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 C1QL2Q7Z5L3 287 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 GALNT11Q8NCW6 608 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 BPIFCQ8NFQ6 507 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 PBDC1Q9BVG4 233 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 hCG_1807616A0A1W2PRN6 198 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 NKX2-8O15522 239 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 GNRHRP30968 328 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 PPT1P50897 306 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 SSTP61278 116 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 PLA2G7Q13093 441 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 SVBPQ8N300 66 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 OR4D5Q8NGN0 318 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 GPR173Q9NS66 373 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 AK3Q9UIJ7 227 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 CARHSP1Q9Y2V2 147 aaKnown RBP4.97□□□□□ -1.61
PTPRD-206ENST00000397617 SPDEFO95238 335 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 GPANK1O95872 356 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 AKR1C4P17516 323 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 WNT5AP41221 380 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 NKX2-1P43699 371 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-206ENST00000397617 HSPB7Q9UBY9 170 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 AKAP13Q12802 2813 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 B9A039 149 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 GEMIN2O14893 280 aaKnown RBP4.97□□□□□ -1.61
PTPRD-206ENST00000397617 SULT1A1P50225 295 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 OR52W1Q6IF63 320 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 C6orf201Q7Z4U5 140 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 ATP6V0BQ99437 205 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 CHODLQ9H9P2 273 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 FN3KRPQ9HA64 309 aa4.97□□□□□ -1.61
PTPRD-206ENST00000397617 NGFP01138 241 aa4.96□□□□□ -1.61
PTPRD-206ENST00000397617 LHBP01229 141 aa4.96□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF44P15621 663 aa4.96□□□□□ -1.61
PTPRD-206ENST00000397617 RPL12P30050 165 aaKnown RBP4.96□□□□□ -1.61
PTPRD-206ENST00000397617 HTR2BP41595 481 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms