RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 HOGA1Q86XE5 327 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 C11orf42Q8N5U0 333 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 SMR3AQ99954 134 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 PCGF1Q9BSM1 259 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 C7orf69Q9H7B7 122 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 KCNS2Q9ULS6 477 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 AUP1Q9Y679 476 aa19.36■□□□□ 0.69
TSPAN4-203ENST00000397397 IGKV1D-8A0A087WSZ0 117 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 J3QLI3 93 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 MMP23AO75900 390 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 SCTP09683 121 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 GDNFP39905 211 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 KIR2DS4P43632 304 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 ZNF45Q02386 682 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 KIR2DS1Q14954 304 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 HEPN1Q6WQI6 88 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 Q6ZS49 121 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 VMO1Q7Z5L0 202 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 SMIM4Q8WVI0 70 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 TMPRSS13Q9BYE2 586 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 LINC00574Q9H8X3 128 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 AKIP1Q9NQ31 210 aa19.35■□□□□ 0.69
TSPAN4-203ENST00000397397 FABP7O15540 132 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 GSTT2P0CG29 244 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 GSTT2BP0CG30 244 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 IGHV1-8P0DP01 117 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 MMP9P14780 707 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 ZNF782Q6ZMW2 699 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 MFSD4AQ8N468 514 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 BEST4Q8NFU0 473 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 S100ZQ8WXG8 99 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 METTL8Q9H825 291 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 SIRT7Q9NRC8 400 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 ANAPC10Q9UM13 185 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 GSTZ1O43708 216 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 RBBP9O75884 186 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 PRTN3P24158 256 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 FPR2P25090 351 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 NFYBP25208 207 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 DLX1P56177 255 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 OR10A7Q8NGE5 316 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 IL1F10Q8WWZ1 152 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 GALMQ96C23 342 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 KIRREL1Q96J84 757 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 TBX15Q96SF7 602 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 SRRQ9GZT4 340 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 YAE1D1Q9NRH1 226 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 KLK11Q9UBX7 282 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 SESN1Q9Y6P5 492 aa19.34■□□□□ 0.69
TSPAN4-203ENST00000397397 ACANP16112 2415 aa19.33■□□□□ 0.69
TSPAN4-203ENST00000397397 F2RL2O00254 374 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 SDCBPO00560 298 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 LY6G6DO95868 133 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 RCVRNP35243 200 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 PRB3Q04118 309 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 OR52W1Q6IF63 320 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 Q8N402 240 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 OR4A4PQ8NGN8 299 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 SNAPC3Q92966 411 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 SUCNR1Q9BXA5 334 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 MTFP1Q9UDX5 166 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 ANXA10Q9UJ72 324 aa19.33■□□□□ 0.68
TSPAN4-203ENST00000397397 IGHV3-43A0A0B4J1X8 118 aa19.32■□□□□ 0.68
TSPAN4-203ENST00000397397 IGHV3-43DP0DP04 118 aa19.32■□□□□ 0.68
TSPAN4-203ENST00000397397 FAM172BPA6NC97 362 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 AVPP01185 164 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 NAT1P18440 290 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 ARPC4P59998 168 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 ACTBP60709 375 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 ACTG1P63261 375 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 TMEM30BQ3MIR4 351 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 CHRFAM7AQ494W8 412 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 IGSF11Q5DX21 431 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 GDPD1Q8N9F7 314 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 OR52L2PQ8NGH6 319 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 THAP7Q9BT49 309 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 UNKLQ9H9P5 680 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 OR2S2Q9NQN1 319 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 GFOD1Q9NXC2 390 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 GNG12Q9UBI6 72 aa19.31■□□□□ 0.68
TSPAN4-203ENST00000397397 ZANQ9Y493 2812 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 IGKV1-6A0A0C4DH72 117 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 HTD2P86397 168 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 SSBP1Q04837 148 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 KLRD1Q13241 179 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 HERPUD1Q15011 391 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 CLEC9AQ6UXN8 241 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 OR52M1Q8NGK5 317 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 LHX4Q969G2 390 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 UPRTQ96BW1 309 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 TMEM133Q9H2Q1 129 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 HEXA-AS1Q9H8Q6 139 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 SLC23A1Q9UHI7 598 aa19.3■□□□□ 0.68
TSPAN4-203ENST00000397397 A8MV72 311 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 BET1O15155 118 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 HOXB4P17483 251 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 COX7A1P24310 79 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 HLA-DMAP28067 261 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 LOXL3P58215 753 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 LSAMPQ13449 338 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms