RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CELSR2Q9HCU4 2923 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 TANC2Q9HCD6 1990 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 CENPEQ02224 2701 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 C5orf51A6NDU8 294 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 FAM25EA8MYX2 175 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 LEUTXA8MZ59 168 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 BCL2L11O43521 198 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 ADAP1O75689 374 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 RHBDL1O75783 438 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 ZNF728P0DKX0 622 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 FCGR2CP31995 323 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 GLP1RP43220 463 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 SHEQ5VZ18 495 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 WDR82Q6UXN9 313 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 SLC38A6Q8IZM9 456 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 LRTM2Q8N967 370 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 OR11L1Q8NGX0 322 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 C2orf50Q96LR7 162 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 NAA60Q9H7X0 242 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 MBD2Q9UBB5 411 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 IGHV1-69-2A0A0G2JMI3 117 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 LRRC30A6NM36 301 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 KNG1P01042 644 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 IRF2P14316 349 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 UBA52P62987 128 aaKnown RBP12.48□□□□□ -0.41
CAPN3-207ENST00000397200 LRRC37A5PQ49AS3 106 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 Q6P435 159 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 SUMF2Q8NBJ7 301 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 OR10Z1Q8NGY1 313 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 THAP6Q8TBB0 222 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 MRPL30Q8TCC3 161 aaKnown RBP12.48□□□□□ -0.41
CAPN3-207ENST00000397200 Q8TCH9 128 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 LRRC29Q8WV35 223 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 ZNF488Q96MN9 340 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 NRIP2Q9BQI9 281 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 PRR13Q9NZ81 148 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 TREM2Q9NZC2 230 aa12.48□□□□□ -0.41
CAPN3-207ENST00000397200 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 IFNL4K9M1U5 179 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 TUSC2O75896 110 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 F12P00748 615 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-207ENST00000397200 PGA5P0DJD9 388 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 RBMXP38159 391 aaKnown RBP12.47□□□□□ -0.41
CAPN3-207ENST00000397200 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 EFNA4P52798 201 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 PIGPP57054 158 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 RBM39Q14498 530 aaKnown RBP12.47□□□□□ -0.41
CAPN3-207ENST00000397200 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 ESCO2Q56NI9 601 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 PRSS54Q6PEW0 395 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 CCL17Q92583 94 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 RDH5Q92781 318 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 OR10C1Q96KK4 312 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 RNF126Q9BV68 326 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 MED9Q9NWA0 146 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 RNF7Q9UBF6 113 aa12.47□□□□□ -0.41
CAPN3-207ENST00000397200 USF3Q68DE3 2245 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 C13orf42A0A1B0GVH6 325 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 MPTX1A8MV57 137 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 H0YIZ8 118 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 PPYP01298 95 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 DAOP14920 347 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 AADACP22760 399 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 CFHR2P36980 270 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 KCNJ3P48549 501 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 MRPS11P82912 194 aaKnown RBP12.46□□□□□ -0.41
CAPN3-207ENST00000397200 TMEM187Q14656 261 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 HFEQ30201 348 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 GAPTQ8N292 157 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 TOMM40LQ969M1 308 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 SUCNR1Q9BXA5 334 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 HES4Q9HCC6 221 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 SLC2A9Q9NRM0 540 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 FBN2P35556 2912 aa12.46□□□□□ -0.41
CAPN3-207ENST00000397200 NBPF19A0A087WUL8 3843 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 KANTRA0A1W2PQU2 76 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 NDUFS7O75251 213 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 LY6HO94772 140 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 CYB5R3P00387 301 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-207ENST00000397200 NMBP08949 121 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 CTXN2P0C2S0 81 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 RRASP10301 218 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 COL8A2P25067 703 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 MDH2P40926 338 aaKnown RBP12.45□□□□□ -0.42
CAPN3-207ENST00000397200 RAB14P61106 215 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 HERV-K104P61576 105 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 RND3P61587 244 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 HERPUD1Q15011 391 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 ZNF146Q15072 292 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 IGSF11Q5DX21 431 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 TGIF2LYQ8IUE0 185 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 FAM185AQ8N0U4 392 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 C1orf87Q8N0U7 546 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 RTN4IP1Q8WWV3 396 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-207ENST00000397200 ST8SIA2Q92186 375 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 TMEM106BQ9NUM4 274 aa12.45□□□□□ -0.42
CAPN3-207ENST00000397200 TEX13DA0A0J9YY54 714 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms