RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PATE4P0C8F1 98 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 GZMHP20718 246 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 VDAC1P21796 283 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 ID3Q02535 119 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 IL24Q13007 206 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 IQCJQ1A5X6 159 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 ZNF818PQ6ZRF7 136 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 CALHM1Q8IU99 346 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 ODF3L1Q8IXM7 274 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 C11orf42Q8N5U0 333 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 RNASEH2CQ8TDP1 164 aaKnown RBP7.88□□□□□ -1.15
CAPN3-206ENST00000397163 FKBP11Q9NYL4 201 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 FOXJ2Q9P0K8 574 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 DKKL1Q9UK85 242 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 PAM16Q9Y3D7 125 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 PTRH2Q9Y3E5 179 aaKnown RBP7.88□□□□□ -1.15
CAPN3-206ENST00000397163 A0A1B0GU03 582 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 BCL2P10415 239 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 TSPAN7P41732 249 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 RND2P52198 227 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 RBM11P57052 281 aaKnown RBP7.88□□□□□ -1.15
CAPN3-206ENST00000397163 MRPS34P82930 218 aaKnown RBP7.88□□□□□ -1.15
CAPN3-206ENST00000397163 EXT1Q16394 746 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 SP5Q6BEB4 398 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-206ENST00000397163 DPPA3Q6W0C5 159 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 ASCL4Q6XD76 172 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 OR1F12Q8NHA8 337 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 ABHD14BQ96IU4 210 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 SIGLEC12Q96PQ1 595 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 RASL10BQ96S79 203 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 TBX15Q96SF7 602 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 PCGF1Q9BSM1 259 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 RSG1Q9BU20 258 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 CDH20Q9HBT6 801 aa7.88□□□□□ -1.15
CAPN3-206ENST00000397163 LAMA1P25391 3075 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 A0A1W2PR80 420 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 OPN1MWP04001 364 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 OPN1MW2P0DN77 364 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 OPN1MW3P0DN78 364 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 CRYGSP22914 178 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 FKBP2P26885 142 aaKnown RBP7.87□□□□□ -1.15
CAPN3-206ENST00000397163 TMEM267Q0VDI3 215 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-206ENST00000397163 FAM27BQ5VT28 67 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 FOXL2NBQ6ZUU3 175 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 SLC25A26Q70HW3 274 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 EXTL1Q92935 676 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
CAPN3-206ENST00000397163 OR51B6Q9H340 312 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 RPRMQ9NS64 109 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 CEBPZOSA8MTT3 80 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 AQP7O14520 342 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 HPRT1P00492 218 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 SCTP09683 121 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 METTL15P1P0C7V9 234 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 CEACAM8P31997 349 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-206ENST00000397163 BRS3P32247 399 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 FUT6P51993 359 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 NMSQ5H8A3 153 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 TOMM20LQ6UXN7 152 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 C16orf82Q7Z2V1 217 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 H1FOOQ8IZA3 346 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-206ENST00000397163 CCL28Q9NRJ3 127 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 PLSCR2Q9NRY7 297 aa7.87□□□□□ -1.15
CAPN3-206ENST00000397163 CISD1Q9NZ45 108 aaKnown RBP7.87□□□□□ -1.15
CAPN3-206ENST00000397163 IGLV3-12A0A075B6K2 115 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 IGKV1D-13A0A0B4J2D9 117 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 G3V3Y1 287 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 HSPB6O14558 160 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 PIAS2O75928 621 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 VAMP5O95183 116 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 TIAF1O95411 115 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 LINC00614P0C842 121 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 IGKV1-13P0DP09 117 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 NPBWR2P48146 333 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 ZFP36L1Q07352 338 aaKnown RBP7.86□□□□□ -1.15
CAPN3-206ENST00000397163 ZNF573Q86YE8 665 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 FADS6Q8N9I5 356 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 TMEM18Q96B42 140 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 PHF7Q9BWX1 381 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-206ENST00000397163 SDF2L1Q9HCN8 221 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 TMEM242Q9NWH2 141 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 CABIN1Q9Y6J0 2220 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 TRBV24-1A0A075B6N3 115 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 TRAV1-1A0A0B4J248 108 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 SYNGR3O43761 229 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 NUPR1O60356 82 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 ZNF32P17041 273 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 CD82P27701 267 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 PAX9P55771 341 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 RABEPKQ7Z6M1 372 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 ZNF611Q8N823 705 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 OR6C1Q96RD1 312 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 PARD6AQ9NPB6 346 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 WNT16Q9UBV4 365 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 SLC22A20A6NK97 555 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 TMEM210A6NLX4 147 aa7.86□□□□□ -1.15
CAPN3-206ENST00000397163 HMGB3O15347 200 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms