RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PCBD1P61457 104 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 SPIN3Q5JUX0 258 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 COLCA1Q6ZS62 124 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 SLC25A26Q70HW3 274 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 TIPARPQ7Z3E1 657 aaKnown RBP11.39□□□□□ -0.59
TRIM40-207ENST00000396581 C1orf87Q8N0U7 546 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 TMEM217Q8N7C4 229 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 OR2V1Q8NHB1 315 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 PIGCQ92535 297 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 FRZBQ92765 325 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 C14orf144Q96I85 54 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 P2RX4Q99571 388 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 FOXB1Q99853 325 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 IGKV1-6A0A0C4DH72 117 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 KIR2DS1A0A191URI9 304 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 C9orf172C9J069 976 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 CBR3O75828 277 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 IFNA10P01566 189 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 IGHEP01854 428 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 BCL2P10415 239 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 B4GALT1P15291 398 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 FOLR3P41439 243 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 KIR2DS4P43632 304 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 FGF12P61328 243 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 PMS2P11Q13670 270 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 KIR2DS1Q14954 304 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 OR2T2Q6IF00 324 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 PIP4P1Q86T03 277 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 NAXEQ8NCW5 288 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 FGFBP3Q8TAT2 258 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 GTF3AQ92664 365 aaKnown RBP11.39□□□□□ -0.59
TRIM40-207ENST00000396581 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 ATP23Q9Y6H3 246 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 MED12Q93074 2177 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 RTTNQ86VV8 2226 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 MMP7P09237 267 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-207ENST00000396581 PATE4P0C8F1 98 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 MPV17LQ2QL34 196 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 ABLIM2Q6H8Q1 611 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 STX12Q86Y82 276 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 CA5BP1Q8WTZ4 195 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 RAB40CQ96S21 281 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 PSMG3Q9BT73 122 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-207ENST00000396581 CDH20Q9HBT6 801 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 PARD6AQ9NPB6 346 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 CCL28Q9NRJ3 127 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 RNF150Q9ULK6 438 aa11.38□□□□□ -0.59
TRIM40-207ENST00000396581 TRBV6-6A0A0A6YYG2 114 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 PGLYRP1O75594 196 aaPredicted RBP11.37□□□□□ -0.59
TRIM40-207ENST00000396581 F2RP25116 425 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 TRIP6Q15654 476 aaKnown RBP11.37□□□□□ -0.59
TRIM40-207ENST00000396581 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 PCSK4Q6UW60 755 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 DHRS13Q6UX07 377 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 GGNQ86UU5 652 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 OR5R1Q8NH85 324 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 ALKBH3Q96Q83 286 aaPredicted RBP11.37□□□□□ -0.59
TRIM40-207ENST00000396581 CTDSP1Q9GZU7 261 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 RIF1Q5UIP0 2472 aaKnown RBP11.37□□□□□ -0.59
TRIM40-207ENST00000396581 A0A0G2JRQ6 117 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 ATXN7O15265 892 aaPredicted RBP11.37□□□□□ -0.59
TRIM40-207ENST00000396581 IFNA5P01569 189 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 OPN1MWP04001 364 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 OPN1MW2P0DN77 364 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 OPN1MW3P0DN78 364 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 BCL3P20749 454 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 SSR4P51571 173 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 PKIAP61925 76 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 TCF15Q12870 199 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 SSPNQ14714 243 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 NRN1LQ496H8 165 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 AAED1Q7RTV5 226 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 C5orf24Q7Z6I8 188 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 KCNE4Q8WWG9 221 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
TRIM40-207ENST00000396581 FGF23Q9GZV9 251 aaPredicted RBP11.37□□□□□ -0.59
TRIM40-207ENST00000396581 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 GNG13Q9P2W3 67 aa11.37□□□□□ -0.59
TRIM40-207ENST00000396581 SRD5A2P31213 254 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 RAB11AP62491 216 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 GAMTQ14353 236 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF726P1Q15940 193 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 CEACAM16Q2WEN9 425 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 HES3Q5TGS1 186 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 CT55Q8WUE5 264 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 GPR146Q96CH1 333 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 ADGRG7Q96K78 797 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 GPHA2Q96T91 129 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 PYGO2Q9BRQ0 406 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 RIMS4Q9H426 269 aaPredicted RBP11.36□□□□□ -0.59
TRIM40-207ENST00000396581 UFSP2Q9NUQ7 469 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 PITPNC1Q9UKF7 332 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 SERF2P84101 59 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF468Q5VIY5 522 aaPredicted RBP11.36□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF787Q6DD87 383 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF880Q6PDB4 577 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 P4HA3Q7Z4N8 544 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 PPP1R32Q7Z5V6 425 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms