RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SWI5Q1ZZU3 235 aa14.01□□□□□ -0.17
TRIM39-205ENST00000396551 SPAG16Q8N0X2 631 aa14.01□□□□□ -0.17
TRIM39-205ENST00000396551 HSD17B11Q8NBQ5 300 aa14.01□□□□□ -0.17
TRIM39-205ENST00000396551 MLNRO43193 412 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 C1QL1O75973 258 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 NXPH2O95156 264 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 NXPH3O95157 252 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 NPBWR1P48145 328 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 HOXA4Q00056 320 aaPredicted RBP14□□□□□ -0.17
TRIM39-205ENST00000396551 ID3Q02535 119 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 DEFB109BQ30KR1 87 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 OR10V1Q8NGI7 309 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 IL22RA2Q969J5 263 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 TAAR3PQ9P1P4 343 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 TINAGQ9UJW2 476 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 CFAP47Q6ZTR5 3102 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 CACNA1GO43497 2377 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14□□□□□ -0.17
TRIM39-205ENST00000396551 CEBPDP49716 269 aaPredicted RBP14□□□□□ -0.17
TRIM39-205ENST00000396551 OR8G1Q15617 311 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 TMEM88Q6PEY1 159 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 PRR18Q8N4B5 295 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 OR51H1Q8NH63 302 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 PURGQ9UJV8 347 aaKnown RBP14□□□□□ -0.17
TRIM39-205ENST00000396551 RFNGQ9Y644 331 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 PSG2P11465 335 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 CD80P33681 288 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 ABHD14BQ96IU4 210 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 LYRM2Q9NU23 88 aaPredicted RBP14□□□□□ -0.17
TRIM39-205ENST00000396551 CACFD1Q9UGQ2 172 aa14□□□□□ -0.17
TRIM39-205ENST00000396551 DMXL1Q9Y485 3027 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 PROB1E7EW31 1015 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 CNOT4O95628 575 aaKnown RBP13.99□□□□□ -0.17
TRIM39-205ENST00000396551 SFTA3P0C7M3 94 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 MIDNQ504T8 468 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 MOB1BQ7L9L4 216 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 TMEM252Q8N6L7 170 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 CLRN3Q8NCR9 226 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 TMEM171Q8WVE6 324 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 TRAPPC2LQ9UL33 140 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 TOR1AO14656 332 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 CLINT1Q14677 625 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 C11orf53Q8IXP5 236 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 SCRT1Q9BWW7 348 aa13.99□□□□□ -0.17
TRIM39-205ENST00000396551 MBNL3Q9NUK0 354 aaKnown RBP13.99□□□□□ -0.17
TRIM39-205ENST00000396551 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 HOXB1P14653 301 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-205ENST00000396551 PVALBP20472 110 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-205ENST00000396551 OMGP23515 440 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 ACSF3Q4G176 576 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-205ENST00000396551 KIAA2026Q5HYC2 2103 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 ZNF826PQ6ZT77 177 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 CBLN2Q8IUK8 224 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 SARAFQ96BY9 339 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 GPR146Q96CH1 333 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 TAAR6Q96RI8 345 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 PLEKHF2Q9H8W4 249 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 HES4Q9HCC6 221 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 WIPI2Q9Y4P8 454 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 INTS1Q8N201 2190 aaKnown RBP13.98□□□□□ -0.17
TRIM39-205ENST00000396551 WNT9BO14905 357 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 PITX3O75364 302 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 IGKV1-39P01597 117 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 IGKV1D-39P04432 117 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 CXorf67Q86X51 503 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-205ENST00000396551 OBP2BQ9NPH6 170 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 DKK4Q9UBT3 224 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 RNF115Q9Y4L5 304 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 TMEM210A6NLX4 147 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 SH2D1BO14796 132 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 WNT2P09544 360 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 LMO1P25800 156 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 SNCAP37840 140 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 DVL1P1P54792 670 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-205ENST00000396551 PAX9P55771 341 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 ZNF616Q08AN1 781 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 FAM209BQ5JX69 171 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 OR14J1Q9UGF5 321 aa13.98□□□□□ -0.17
TRIM39-205ENST00000396551 MED19A0JLT2 244 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-205ENST00000396551 PSPNO60542 156 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 WDR1O75083 606 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 CAMLGP49069 296 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 HMGN3Q15651 99 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 IZUMO4Q1ZYL8 232 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 C1orf162Q8NEQ5 155 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-205ENST00000396551 OR8G5Q8NG78 346 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 C19orf12Q9NSK7 152 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 LUZP4Q9P127 313 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 CHST1O43916 411 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 TSPAN15O95858 294 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 HAND1O96004 215 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 CECR9P0C854 216 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 EPHA1P21709 976 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 VAMP2P63027 116 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 DHRS7BQ6IAN0 325 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-205ENST00000396551 IGF2-ASQ6U949 168 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 TMEM182Q6ZP80 229 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-205ENST00000396551 ZNF295-AS1Q8N0V1 137 aa13.97□□□□□ -0.17
TRIM39-205ENST00000396551 RBM14Q96PK6 669 aaKnown RBP13.97□□□□□ -0.17
TRIM39-205ENST00000396551 FZR1Q9UM11 496 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms