RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 NID2Q14112 1375 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 DHX57Q6P158 1386 aaKnown RBP3.73□□□□□ -1.81
GABPB1-204ENST00000396464 TRPM2O94759 1503 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 MYO5BQ9ULV0 1848 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 PMS2P5A8MQ11 134 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 UPK2O00526 184 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 ORC5O43913 435 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 LYPLA1O75608 230 aaPredicted RBP3.73□□□□□ -1.81
GABPB1-204ENST00000396464 DUSP14O95147 198 aaKnown RBP3.73□□□□□ -1.81
GABPB1-204ENST00000396464 FABP3P05413 133 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 SULT1A3P0DMM9 295 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 SULT1A4P0DMN0 295 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 MARCKSL1P49006 195 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 RAB2AP61019 212 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 PNOCQ13519 176 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 JOSD1Q15040 202 aaPredicted RBP3.73□□□□□ -1.81
GABPB1-204ENST00000396464 PRR4Q16378 134 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 LPCAT3Q6P1A2 487 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 DNAJC24Q6P3W2 148 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 SLC16A13Q7RTY0 426 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 CADM2Q8N3J6 435 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 LRRC18Q8N456 261 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 FXYD5Q96DB9 178 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 ACY3Q96HD9 319 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 OR52E6Q96RD3 313 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 EBF4Q9BQW3 602 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 POLR2J2Q9GZM3 115 aaKnown RBP3.73□□□□□ -1.81
GABPB1-204ENST00000396464 POLR2J3Q9H1A7 115 aaKnown RBP3.73□□□□□ -1.81
GABPB1-204ENST00000396464 CISHQ9NSE2 258 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 MDFICQ9P1T7 246 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 HDGFL3Q9Y3E1 203 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 ADGRB3O60242 1522 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 LMTK2Q8IWU2 1503 aa3.73□□□□□ -1.81
GABPB1-204ENST00000396464 POLR1AO95602 1720 aaPredicted RBP3.72□□□□□ -1.81
GABPB1-204ENST00000396464 UGGT1Q9NYU2 1555 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 PIK3C2GO75747 1445 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 UHRF1BP1Q6BDS2 1440 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 IGKV1-27A0A075B6S5 117 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 IGHV6-1A0A0B4J1U7 121 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 FAM236DA0A1B0GTK5 79 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 PLAC8L1A1L4L8 177 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 PGPA6NDG6 321 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF98A6NK75 572 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 RFPL4AA6NLU0 287 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 LINC00587B1AMM8 73 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 D6RAR5 112 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 RFPL4AL1F8VTS6 287 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 SMIM24O75264 130 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF253O75346 499 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 KBTBD11O94819 623 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 HBZP02008 142 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 PATE4P0C8F1 98 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 FAM236CP0DP71 79 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 MAP2K4P45985 399 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 CCR6P51684 374 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 GFERP55789 205 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 SYNJ2BPP57105 145 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 CDC42P60953 191 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 HSPE1P61604 102 aaKnown RBP3.72□□□□□ -1.81
GABPB1-204ENST00000396464 PAX8Q06710 450 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 CD47Q08722 323 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 GUCA2BQ16661 112 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 LRRC10Q5BKY1 277 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 TMEM78Q5T7P6 136 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 TBPL2Q6SJ96 375 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 TMEM205Q6UW68 189 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 DOLPP1Q86YN1 238 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 OR52L1Q8NGH7 329 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 CD200R1Q8TD46 325 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 SKA2Q8WVK7 121 aaPredicted RBP3.72□□□□□ -1.81
GABPB1-204ENST00000396464 ITLN1Q8WWA0 313 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 OR5M11Q96RB7 305 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 LINC01587Q99440 93 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF184Q99676 751 aaPredicted RBP3.72□□□□□ -1.81
GABPB1-204ENST00000396464 SYT15Q9BQS2 421 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 CHCHD5Q9BSY4 110 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 MS4A8Q9BY19 250 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 SLC17A9Q9BYT1 436 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 OR51I2Q9H344 312 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 Q9H3A6 140 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 SLC25A22Q9H936 323 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 PYCARDQ9ULZ3 195 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 FLVCR1Q9Y5Y0 555 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF780BQ9Y6R6 833 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 ENPP4Q9Y6X5 453 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 ERVK-7P63135 1459 aa3.72□□□□□ -1.81
GABPB1-204ENST00000396464 CEP170BQ9Y4F5 1589 aaPredicted RBP3.72□□□□□ -1.81
GABPB1-204ENST00000396464 NPATQ14207 1427 aa3.71□□□□□ -1.81
GABPB1-204ENST00000396464 TRAV8-3A0A0A6YYJ7 113 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 MAP1LC3B2A6NCE7 125 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 GMNCA6NCL1 334 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 UPK1AO00322 258 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 CST8O60676 142 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 APOC1P02654 83 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 ZBTB25P24278 435 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 COX7A1P24310 79 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 S100A7P31151 101 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 APLNRP35414 380 aa3.71□□□□□ -1.82
GABPB1-204ENST00000396464 TALDO1P37837 337 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms