RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SERPINF1P36955 418 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 PHLDA2Q53GA4 152 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM42Q69YG0 159 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CMBLQ96DG6 245 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CNTNAP3BQ96NU0 1288 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SOSTQ9BQB4 213 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF649Q9BS31 505 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HINT2Q9BX68 163 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 AKIRIN1Q9H9L7 192 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 COA4Q9NYJ1 87 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 COL4A3Q01955 1670 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 KALRNO60229 2985 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 TUSC2O75896 110 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HTD2P86397 168 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 MDP1Q86V88 176 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 OR2C3Q8N628 320 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 OR10AD1Q8NGE0 317 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 ST8SIA2Q92186 375 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM222Q9H0R3 208 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HEXA-AS1Q9H8Q6 139 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 ASCL3Q9NQ33 180 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 KPTNQ9Y664 436 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 LY6G6EA0A0G2JKS1 128 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 C3orf85A0A1B0GTC6 90 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 MBPP02686 304 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 PRAMEF5Q5TYX0 476 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 PRAMEF6Q5VXH4 476 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 UBAC2Q8NBM4 344 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 UFSP2Q9NUQ7 469 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SIRT4Q9Y6E7 314 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 U3KQA8 63 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 MT-ND4LP03901 98 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 APOBEC3AP31941 199 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF83P51522 516 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SELENOTP62341 195 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 EDDM3AQ14507 147 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 VMA21Q3ZAQ7 101 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF468Q5VIY5 522 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 DHRS11Q6UWP2 260 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 IGFL2Q6UWQ7 119 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 LSM10Q969L4 123 aaKnown RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 PFDN5Q99471 154 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 C19orf24Q9BVV8 132 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 WNT5BQ9H1J7 359 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SH2D2AQ9NP31 389 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 BIN3Q9NQY0 253 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 RNF115Q9Y4L5 304 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CEACAM18A8MTB9 384 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 IQCF6A8MYZ5 107 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 K7N7A8 449 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 DVL1O14640 695 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HAND1O96004 215 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CHATP28329 748 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 P2RY1P47900 373 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 PSMB3P49720 205 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 DVL1P1P54792 670 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HIST1H3AP68431 136 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 INPP5JQ15735 1006 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HIST2H3PS2Q5TEC6 136 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HIST2H3AQ71DI3 136 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 MAFIPQ8WZ33 124 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 ST8SIA4Q92187 359 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SIGLEC12Q96PQ1 595 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SH3BGRL2Q9UJC5 107 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CLEC18AA5D8T8 446 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SDCBPO00560 298 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HSPB6O14558 160 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SHOXO15266 292 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CLPSP04118 112 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CT45A6P0DMU7 189 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CT45A5P0DMU8 189 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CT45A7P0DMV0 189 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 BMI1P35226 326 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 HIKESHIQ53FT3 197 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CT45A1Q5HYN5 189 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 BRICD5Q6PL45 260 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 BTNL3Q6UXE8 466 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CLEC18CQ8NCF0 446 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 CT45A3Q8NHU0 189 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 SLC25A40Q8TBP6 338 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 RPUSD4Q96CM3 377 aaKnown RBP2.92□□□□□ -1.94
VPS13C-203ENST00000395896 UHRF2Q96PU4 802 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 KLHDC2Q9Y2U9 406 aa2.92□□□□□ -1.94
VPS13C-203ENST00000395896 PROB1E7EW31 1015 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SYNGR1O43759 233 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 COL4A2P08572 1712 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 MMP7P09237 267 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 USF1P22415 310 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR5AS1Q8N127 324 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 KCNRGQ8N5I3 272 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SLC35E1Q96K37 410 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 CELA2AP08217 269 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR8U8P0C7N1 319 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 CFHR2P36980 270 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 GCSAMQ8N6F7 178 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 BOLLQ8N9W6 283 aaKnown RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR10A7Q8NGE5 316 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR5P3Q8WZ94 311 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ADGRG7Q96K78 797 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms