RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ANKRD13BQ86YJ7 626 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 BEND2Q8NDZ0 799 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 OR10R2Q8NGX6 335 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 NDNFQ8TB73 568 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 SETD6Q8TBK2 473 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 SSMEM1Q8WWF3 244 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 TMEM158Q8WZ71 300 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 TAF15Q92804 592 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNCA-203ENST00000394986 PTX4Q96A99 478 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 RAB3CQ96E17 227 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 C19orf24Q9BVV8 132 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 CHIAQ9BZP6 476 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 ZMAT3Q9HA38 289 aaKnown RBP16.13■□□□□ 0.17
SNCA-203ENST00000394986 TAF9BQ9HBM6 251 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 KCNK7Q9Y2U2 307 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 COL6A5A8TX70 2615 aa16.13■□□□□ 0.17
SNCA-203ENST00000394986 A0A1W2PPE3 182 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 SDCBPO00560 298 aaPredicted RBP16.12■□□□□ 0.17
SNCA-203ENST00000394986 GABARAPO95166 117 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 IGLV1-47P01700 117 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 RNASE1P07998 156 aaKnown RBP16.12■□□□□ 0.17
SNCA-203ENST00000394986 GNB3P16520 340 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 SSX2Q16385 188 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 CTF1Q16619 201 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 PSG11Q9UQ72 335 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 HILPDAQ9Y5L2 63 aa16.12■□□□□ 0.17
SNCA-203ENST00000394986 METTL21EPA6NDL7 271 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 CLDN34H7C241 214 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 F2RL2O00254 374 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 TOR1AO14656 332 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 SPINT2O43291 252 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 LOXL3P58215 753 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 HLA-DRB5Q30154 266 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 OR10A7Q8NGE5 316 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 FAM216AQ8WUB2 273 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 SLC25A38Q96DW6 304 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 GFOD1Q9NXC2 390 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 MFNGO00587 321 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 HIST1H1DP16402 221 aaKnown RBP16.11■□□□□ 0.17
SNCA-203ENST00000394986 HTR1DP28221 377 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 FAM189A2Q15884 450 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 TRAT1Q6PIZ9 186 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 OR10V1Q8NGI7 309 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 OR9G1Q8NH87 305 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 ZNF596Q8TC21 504 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 ZFAND2BQ8WV99 257 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 SSX3Q99909 188 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 CMSS1Q9BQ75 279 aaKnown RBP16.11■□□□□ 0.17
SNCA-203ENST00000394986 MEGF9Q9H1U4 602 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 C12orf4Q9NQ89 552 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 RHBDL2Q9NX52 303 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 KCNIP1Q9NZI2 227 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 ELF5Q9UKW6 265 aaPredicted RBP16.11■□□□□ 0.17
SNCA-203ENST00000394986 POMT1Q9Y6A1 747 aa16.11■□□□□ 0.17
SNCA-203ENST00000394986 H3BUX3 64 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 J3QR06 171 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 GNMTQ14749 295 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 HMGN3Q15651 99 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 LRRC75BQ2VPJ9 315 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 MINOS1Q5TGZ0 78 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 ZNF880Q6PDB4 577 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 TMEM86BQ8N661 226 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 SLC25A46Q96AG3 418 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 MALSU1Q96EH3 234 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 MMP28Q9H239 520 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 DPAGT1Q9H3H5 408 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 ETV7Q9Y603 341 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 MINOS1-NBL1R4GNA1 71 aa16.1■□□□□ 0.17
SNCA-203ENST00000394986 BUB1B-PAK6H3BSN5 160 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 RAB13P51153 203 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 PRRX1P54821 245 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 ACTG1P63261 375 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 LY6EQ16553 131 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 CLVS1Q8IUQ0 354 aaPredicted RBP16.09■□□□□ 0.17
SNCA-203ENST00000394986 OR52L2PQ8NGH6 319 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 OR52M1Q8NGK5 317 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 DPM3Q9P2X0 92 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 GNG12Q9UBI6 72 aa16.09■□□□□ 0.17
SNCA-203ENST00000394986 TRBV6-6A0A0A6YYG2 114 aa16.08■□□□□ 0.16
SNCA-203ENST00000394986 FAM181BA6NEQ2 426 aa16.08■□□□□ 0.16
SNCA-203ENST00000394986 SLC31A2O15432 143 aa16.08■□□□□ 0.16
SNCA-203ENST00000394986 RPL5P46777 297 aaKnown RBP16.08■□□□□ 0.16
SNCA-203ENST00000394986 SCAND1P57086 179 aa16.08■□□□□ 0.16
SNCA-203ENST00000394986 C16orf87Q6PH81 154 aa16.08■□□□□ 0.16
SNCA-203ENST00000394986 RIMS4Q9H426 269 aaPredicted RBP16.08■□□□□ 0.16
SNCA-203ENST00000394986 ABRACLQ9P1F3 81 aa16.08■□□□□ 0.16
SNCA-203ENST00000394986 BTBD17A6NE02 478 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 GPR137BO60478 399 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 CD3GP09693 182 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 PPP1CCP36873 323 aaKnown RBP16.07■□□□□ 0.16
SNCA-203ENST00000394986 DIAPH2-AS1Q14236 149 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 CDNFQ49AH0 187 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 TPTE2P1Q5T6R2 138 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 MOB1BQ7L9L4 216 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 ZNF554Q86TJ5 538 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 CROCCP3Q8IVE0 287 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 IZUMO1Q8IYV9 350 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 PIFOQ8TCI5 191 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 IL1F10Q8WWZ1 152 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 MAFIPQ8WZ33 124 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms