RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 OR10C1Q96KK4 312 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 NEU3Q9UQ49 428 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 DOCK5Q9H7D0 1870 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 UBR3Q6ZT12 1888 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 FGF5P12034 268 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 CTSSP25774 331 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 NPY1RP25929 384 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 ZNF273Q14593 569 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 OR10D4PQ8NGN7 298 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 EAF1Q96JC9 268 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-203ENST00000394872 PRSS50Q9UI38 385 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 EPOPA6NHQ4 379 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 ZNHIT1O43257 154 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 WNT5AP41221 380 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 TFPI2P48307 235 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 PSG4Q00888 419 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 MESP2Q0VG99 397 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 SHISA5Q8N114 240 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 SLC25A45Q8N413 288 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 MS4A10Q96PG2 267 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 MRPL37Q9BZE1 423 aaKnown RBP9.05□□□□□ -0.96
COL4A6-203ENST00000394872 SLC2A9Q9NRM0 540 aa9.05□□□□□ -0.96
COL4A6-203ENST00000394872 MFNGO00587 321 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 RHBDL1O75783 438 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 ZP4Q12836 540 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 INPP5JQ15735 1006 aaPredicted RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 RNFT1Q5M7Z0 435 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 SLC35E4Q6ICL7 350 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 ANGPTL4Q9BY76 406 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 QSER1Q2KHR3 1735 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 OR4C45A6NMZ5 311 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 GAPDHP04406 335 aaKnown RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 HERVK_113P61574 105 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 TMEM183BQ1AE95 376 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 FHL5Q5TD97 284 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 OR1K1Q8NGR3 316 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 ANAPC16Q96DE5 110 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 Q9N2K0 584 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 NKX2-6A6NCS4 301 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 HMSDA8MTL9 139 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 PSMB2P49721 201 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 TCTEX1D1Q8N7M0 179 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 ADAD2Q8NCV1 583 aaKnown RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 SAP25Q8TEE9 199 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 MRPL24Q96A35 216 aaKnown RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 PGLYRP3Q96LB9 341 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 GHITMQ9H3K2 345 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 HIGD1AQ9Y241 93 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 RBM11P57052 281 aaKnown RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 IZUMO4Q1ZYL8 232 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 OR10G8Q8NGN5 311 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 OR1L6Q8NGR2 347 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 ZNF519Q8TB69 540 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 SRSF10O75494 262 aaKnown RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 FAM157CP0CG43 387 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 PF4V1P10720 104 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 TGIF1Q15583 401 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 TPRX1Q8N7U7 411 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 ITLN1Q8WWA0 313 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 SNRNP40Q96DI7 357 aaKnown RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 HDHD3Q9BSH5 251 aaPredicted RBP9.04□□□□□ -0.96
COL4A6-203ENST00000394872 MARVELD1Q9BSK0 173 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 TRAV8-7A0A075B6U6 113 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 GFRA1P56159 465 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 TMEM50BP56557 158 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 TEPPQ6URK8 271 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 BVESQ8NE79 360 aa9.04□□□□□ -0.96
COL4A6-203ENST00000394872 CENPVL1A0A0U1RR11 272 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 PRR19A6NJB7 356 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 HAX1O00165 279 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 ROM1Q03395 351 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 BSXQ3C1V8 233 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 CEACAM21Q3KPI0 293 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 IL22RA2Q969J5 263 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 LPAR5Q9H1C0 372 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 CCL27Q9Y4X3 112 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 A0A1B0GU03 582 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 CDRT15L2A8MXV6 281 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 NAT2P11245 290 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 FAM27BQ5VT28 67 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 IGHV3-72A0A0B4J1Y9 119 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 MFSD2BA6NFX1 497 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 VSIG8P0DPA2 414 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 EBLN2Q6P2I7 272 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 LYZL2Q7Z4W2 148 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 PRDM14Q9GZV8 571 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 THSD7AQ9UPZ6 1657 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 B2MP61769 119 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 EWSR1Q01844 656 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL4A6-203ENST00000394872 ZPLD1Q8TCW7 415 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 CCL19Q99731 98 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 ZDHHC8Q9ULC8 765 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 TRAV34A0A0B4J273 112 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 CXorf1O96002 111 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 KIR3DL2P43630 455 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 ATP1A1-AS1Q5TC04 95 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 LYRM7Q5U5X0 104 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 ZCCHC14Q8WYQ9 949 aaKnown RBP9.03□□□□□ -0.96
COL4A6-203ENST00000394872 WNT2BQ93097 391 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms