RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 WDR86Q86TI4 376 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 MKXQ8IYA7 352 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 FDCSPQ8NFU4 85 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 TRGV5A0A0B4J1U4 118 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 IL18BPO95998 194 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 IGKV1-39P01597 117 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 IGKV1D-39P04432 117 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 CEBPDP49716 269 aaPredicted RBP11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 MEOX2P50222 304 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 RND3P61587 244 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 VAMP2P63027 116 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 TLE1Q04724 770 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 ZNF343Q6P1L6 599 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 C15orf54Q8N8G6 183 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 OR5P3Q8WZ94 311 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 APOBEC3DQ96AK3 386 aaPredicted RBP11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 EGLN1Q9GZT9 426 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 KCNJ16Q9NPI9 418 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 ATP23Q9Y6H3 246 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 MAP1BP46821 2468 aaKnown RBP11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 SIRPB1O00241 398 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 TXNL1O43396 289 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 SS18L1O75177 396 aaPredicted RBP11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 IAPPP10997 89 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 UCP1P25874 307 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 TNFSF10P50591 281 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 ID3Q02535 119 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 ZNF324BQ6AW86 544 aaPredicted RBP11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 NANPQ8TBE9 248 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 VSIRQ9H7M9 311 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 PLEKHF2Q9H8W4 249 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 DLL3Q9NYJ7 618 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 PPP1R3CQ9UQK1 317 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 MMP24Q9Y5R2 645 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 PTPRZ1P23471 2315 aaPredicted RBP11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 PITX3O75364 302 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 OR1K1Q8NGR3 316 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 WDYHV1Q96HA8 205 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 RNF115Q9Y4L5 304 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 C1orf196B1AJZ1 125 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 IGLV2-14P01704 120 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 ZNF16P17020 682 aaPredicted RBP11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 CD82P27701 267 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 RAB5BP61020 215 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 RPS23P62266 143 aaKnown RBP11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 ARL16Q0P5N6 197 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 EIF2S3LQ2VIR3 472 aaKnown RBP11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 MDP1Q86V88 176 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 TMEM178AQ8NBL3 297 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 RSG1Q9BU20 258 aa11.44□□□□□ -0.58
GTF2F1-201ENST00000394456 NQO2P16083 231 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 RAB5AP20339 215 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 TCF15Q12870 199 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 RNPS1Q15287 305 aaKnown RBP11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 TECTBQ96PL2 329 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 RBFOX3A6NFN3 312 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 SLC34A2O95436 690 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 FOLR2P14207 255 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 VDAC1P21796 283 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 F2RP25116 425 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 SOX8P57073 446 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 FABP9Q0Z7S8 132 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 NRN1LQ496H8 165 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 SSX7Q7RTT5 188 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM58AQ8N1B3 248 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 CYB561D1Q8N8Q1 229 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 HIST1H2AAQ96QV6 131 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
GTF2F1-201ENST00000394456 KIAA1324LA8MWY0 1029 aaPredicted RBP11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 CNOT4O95628 575 aaKnown RBP11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 ZNF14P17017 642 aaPredicted RBP11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 AGAP20933 346 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 SOHLH1Q5JUK2 328 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM180AQ6UWF9 173 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 Q6ZS49 121 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 THNSL2Q86YJ6 484 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 OR5A2Q8NGI9 324 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 RPS16P62249 146 aaKnown RBP11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 CLN3Q13286 438 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 ICAM4Q14773 271 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 CXorf67Q86X51 503 aaPredicted RBP11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM185AQ8N0U4 392 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 GCNT2Q8N0V5 402 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 BCL2L14Q9BZR8 327 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 ZDHHC11Q9H8X9 412 aa11.42□□□□□ -0.58
GTF2F1-201ENST00000394456 CACNA1GO43497 2377 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 RP1L1Q8IWN7 2480 aaPredicted RBP11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 IGKV1-5P01602 117 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 PMELP40967 661 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FGF8P55075 233 aaPredicted RBP11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 ZNF266Q14584 549 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 TESK1Q15569 626 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 OR2B11Q5JQS5 317 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms