RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 KDM3BQ7LBC6 1761 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 EML5Q05BV3 1969 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 OR4D5Q8NGN0 318 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 SIGLEC11Q96RL6 698 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 METTL26Q96S19 204 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 PAXXQ9BUH6 204 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 C17orf51A8MQB3 221 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 H3BRM9 83 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 WNT1P04628 370 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 MEF2BQ02080 365 aaPredicted RBP11.9□□□□□ -0.5
USP49-203ENST00000394253 COL9A2Q14055 689 aaPredicted RBP11.9□□□□□ -0.5
USP49-203ENST00000394253 BHLHA15Q7RTS1 189 aaPredicted RBP11.9□□□□□ -0.5
USP49-203ENST00000394253 SSMEM1Q8WWF3 244 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 SIRT5Q9NXA8 310 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 ATP5IP56385 69 aaPredicted RBP11.9□□□□□ -0.51
USP49-203ENST00000394253 FAHD1Q6P587 224 aa11.9□□□□□ -0.51
USP49-203ENST00000394253 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.51
USP49-203ENST00000394253 HRO43593 1189 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 HIGD1AQ9Y241 93 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 CCL14Q16627 93 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 TMEFF1Q8IYR6 380 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 PTP4A1Q93096 173 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 PFN3P60673 137 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 TNXAQ16473 311 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 C10orf35Q96D05 121 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 F2RL2O00254 374 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 FCGR2BP31994 310 aaPredicted RBP11.89□□□□□ -0.51
USP49-203ENST00000394253 PARLQ9H300 379 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 MED19A0JLT2 244 aaPredicted RBP11.89□□□□□ -0.51
USP49-203ENST00000394253 WNT9BO14905 357 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 SEC11BP0C7V7 166 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 SPINK9Q5DT21 86 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 NPFFR1Q9GZQ6 430 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 PLEKHB1Q9UF11 243 aaPredicted RBP11.89□□□□□ -0.51
USP49-203ENST00000394253 PPIHO43447 177 aaKnown RBP11.89□□□□□ -0.51
USP49-203ENST00000394253 FMODQ06828 376 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
USP49-203ENST00000394253 MRPL18Q9H0U6 180 aaKnown RBP11.89□□□□□ -0.51
USP49-203ENST00000394253 SMOC1Q9H4F8 434 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 HSPB7Q9UBY9 170 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 ZNF236Q9UL36 1845 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 ICOSLGO75144 302 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 MGAT2Q10469 447 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 HDHD3Q9BSH5 251 aaPredicted RBP11.89□□□□□ -0.51
USP49-203ENST00000394253 ELOVL5Q9NYP7 299 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 RREB1Q92766 1687 aa11.89□□□□□ -0.51
USP49-203ENST00000394253 IQCF3P0C7M6 154 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 TTC9BQ8N6N2 239 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 FGF5P12034 268 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 GGACTQ9BVM4 153 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 CBLN4Q9NTU7 201 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 ERGP11308 486 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 CA6P23280 308 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 RIPPLY2Q5TAB7 128 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 C6orf15Q6UXA7 325 aaPredicted RBP11.88□□□□□ -0.51
USP49-203ENST00000394253 NFAM1Q8NET5 270 aaPredicted RBP11.88□□□□□ -0.51
USP49-203ENST00000394253 TMEM45BQ96B21 275 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 DIRC2Q96SL1 478 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 LINC00470Q9BZP3 86 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 KBTBD11-OT1A0A1B0GTJ5 212 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
USP49-203ENST00000394253 MVB12AQ96EY5 273 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 ZDHHC8Q9ULC8 765 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 TRBV7-9A0A0J9YWB2 115 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 APOMO95445 188 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 METRNLQ641Q3 311 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 MRC1P22897 1456 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
USP49-203ENST00000394253 CTDSPLO15194 276 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 PAGE4O60829 102 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 DNASE2BQ8WZ79 361 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 FBXO17Q96EF6 278 aa11.88□□□□□ -0.51
USP49-203ENST00000394253 SPRY3O43610 288 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 TMIGD3P0DMS9 266 aaPredicted RBP11.87□□□□□ -0.51
USP49-203ENST00000394253 PLAURQ03405 335 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 FAM27D1Q5T7N8 215 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 C15orf39Q6ZRI6 1047 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
USP49-203ENST00000394253 PCOLCE2Q9UKZ9 415 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 C1SP09871 688 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 ASB5Q8WWX0 329 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 IL23AQ9NPF7 189 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 DPRXA6NFQ7 191 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 FRG2CA6NGY1 282 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 DSCR4P56555 118 aaPredicted RBP11.87□□□□□ -0.51
USP49-203ENST00000394253 FZD5Q13467 585 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 C9orf62Q8N4C0 152 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 INSM2Q96T92 566 aaPredicted RBP11.87□□□□□ -0.51
USP49-203ENST00000394253 OPN3Q9H1Y3 402 aaPredicted RBP11.87□□□□□ -0.51
USP49-203ENST00000394253 LTB4R2Q9NPC1 389 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 A0A1W2PS18 150 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 SH2D5Q6ZV89 423 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 MAVSQ7Z434 540 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 NPIPB8E9PQR5 432 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms