RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 GNG12Q9UBI6 72 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SCN2AQ99250 2005 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 ARID1AO14497 2285 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 IGFBP4P22692 258 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 GPX4P36969 197 aaPredicted RBP7.47□□□□□ -1.21
GABRA1-202ENST00000393943 RUNX1Q01196 453 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 TGIF1Q15583 401 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 ASPHD2Q6ICH7 369 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 OR4C5Q8NGB2 326 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 LYPD6BQ8NI32 183 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM170AQ8WVE7 144 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 HINT2Q9BX68 163 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 CRISPLD2Q9H0B8 497 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM38BQ9NVV0 291 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 SPTBP11277 2137 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 HSBP1O75506 76 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 PTTG1IPP53801 180 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 PYY3Q5JQD4 70 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 C19orf35Q6ZS72 473 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 RNF2Q99496 336 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 VSTM5A8MXK1 200 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 MKRN2OSH3BPM6 223 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 TNFSF11O14788 317 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 CXorf1O96002 111 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 CSRP1P21291 193 aaKnown RBP7.47□□□□□ -1.21
GABRA1-202ENST00000393943 GPM6AP51674 278 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 GAB4Q2WGN9 574 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 OR4D5Q8NGN0 318 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 MBD3L1Q8WWY6 194 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 MESP1Q9BRJ9 268 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
GABRA1-202ENST00000393943 C5orf49A4QMS7 147 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 SRSF10O75494 262 aaKnown RBP7.46□□□□□ -1.21
GABRA1-202ENST00000393943 SCGB2A1O75556 95 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 BRS3P32247 399 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 HLA-DRB5Q30154 266 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 PIGYQ3MUY2 71 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF343Q6P1L6 599 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 MYPOPQ86VE0 399 aaPredicted RBP7.46□□□□□ -1.21
GABRA1-202ENST00000393943 OR11L1Q8NGX0 322 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 RLN3Q8WXF3 142 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 MRPL13Q9BYD1 178 aaKnown RBP7.46□□□□□ -1.21
GABRA1-202ENST00000393943 NAT8BQ9UHF3 227 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 FOXD3Q9UJU5 478 aaPredicted RBP7.46□□□□□ -1.21
GABRA1-202ENST00000393943 TCFL5Q9UL49 500 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 RAMP1O60894 148 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 OTX2P32243 289 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 MAS1LP35410 378 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 CYB561P49447 251 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 SPNS3Q6ZMD2 512 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 WFIKKN1Q96NZ8 548 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 IMMP2LQ96T52 175 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 OR2H1Q9GZK4 316 aa7.46□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF552Q9H707 407 aaPredicted RBP7.46□□□□□ -1.21
GABRA1-202ENST00000393943 A0A087WV48 116 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 SHISA8B8ZZ34 492 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 CXCL13O43927 109 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 PIAS2O75928 621 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 GPR12P47775 334 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 VAMP3Q15836 100 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 PMCHL1Q16048 86 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 CXorf66Q5JRM2 361 aaPredicted RBP7.46□□□□□ -1.22
GABRA1-202ENST00000393943 ZNF468Q5VIY5 522 aaPredicted RBP7.46□□□□□ -1.22
GABRA1-202ENST00000393943 OR2D3Q8NGH3 330 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 RNASEH2CQ8TDP1 164 aaKnown RBP7.46□□□□□ -1.22
GABRA1-202ENST00000393943 GNRHR2Q96P88 292 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 HIST1H2BLQ99880 126 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 VPS25Q9BRG1 176 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 UQCR10Q9UDW1 63 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 TGFBR3LH3BV60 316 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 CFIP05156 583 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 RND2P52198 227 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 SRYQ05066 204 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 CLEC12BQ2HXU8 276 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 RIPPLY2Q5TAB7 128 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 DTD1Q8TEA8 209 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
GABRA1-202ENST00000393943 PCGF1Q9BSM1 259 aa7.46□□□□□ -1.22
GABRA1-202ENST00000393943 PAGE4O60829 102 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 CELA2BP08218 269 aaPredicted RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 AMTP48728 403 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 GNG4P50150 75 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 DMWDQ09019 674 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 LRP11Q86VZ4 500 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 TMEM54Q969K7 222 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 ALKBH3Q96Q83 286 aaPredicted RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 TMEM74BQ9NUR3 256 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 NDUFS6O75380 124 aaKnown RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 PGLYRP1O75594 196 aaPredicted RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 OR5G3P0C626 314 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 MGST1P10620 155 aaKnown RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 IL11P20809 199 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 UCP2P55851 309 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 LRRC75BQ2VPJ9 315 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 STUMQ69YW2 141 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 STARD4Q96DR4 205 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 RASL10BQ96S79 203 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 SH2D2AQ9NP31 389 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 MTCH1Q9NZJ7 389 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms