RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 IAPPP10997 89 aa9.11□□□□□ -0.95
CALD1-203ENST00000393118 GNG3P63215 75 aa9.11□□□□□ -0.95
CALD1-203ENST00000393118 ZNF266Q14584 549 aa9.11□□□□□ -0.95
CALD1-203ENST00000393118 ZIC4Q8N9L1 334 aa9.11□□□□□ -0.95
CALD1-203ENST00000393118 RTL8AQ9BWD3 113 aa9.11□□□□□ -0.95
CALD1-203ENST00000393118 COX5BP10606 129 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 PMP22Q01453 160 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 TNFRSF9Q07011 255 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 KCNMB1Q16558 191 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 FGFBP3Q8TAT2 258 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 IL22RA2Q969J5 263 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 TVP23CQ96ET8 276 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 CYYR1Q96J86 154 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 WFIKKN1Q96NZ8 548 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 PNRC2Q9NPJ4 139 aaKnown RBP9.1□□□□□ -0.95
CALD1-203ENST00000393118 SHANK1Q9Y566 2161 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
CALD1-203ENST00000393118 C11orf42Q8N5U0 333 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 NOL4LQ96MY1 436 aaPredicted RBP9.1□□□□□ -0.95
CALD1-203ENST00000393118 M0R296 226 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 PGA5P0DJD9 388 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 RBM11P57052 281 aaKnown RBP9.1□□□□□ -0.95
CALD1-203ENST00000393118 ZFP36L1Q07352 338 aaKnown RBP9.1□□□□□ -0.95
CALD1-203ENST00000393118 CSRP2Q16527 193 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 OR8G2PQ6IF36 304 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 SLC23A3Q6PIS1 610 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 SMIM15Q7Z3B0 74 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 CALHM1Q8IU99 346 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 FAM58AQ8N1B3 248 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 GAPTQ8N292 157 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 ZNF709Q8N972 641 aa9.1□□□□□ -0.95
CALD1-203ENST00000393118 RTBDNQ9BSG5 229 aaPredicted RBP9.1□□□□□ -0.95
CALD1-203ENST00000393118 PINLYPA6NC86 204 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 SYNGR3O43761 229 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 CLDN1O95832 211 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 IL2RAP01589 272 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 LIAT1Q6ZQX7 453 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 TBC1D26Q86UD7 250 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 LFNGQ8NES3 379 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 CCL28Q9NRJ3 127 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 WSB1Q9Y6I7 421 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 PRRC2CQ9Y520 2896 aaKnown RBP9.09□□□□□ -0.95
CALD1-203ENST00000393118 H3BQ15 152 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 DLK1P80370 383 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 MYOZ1Q9NP98 299 aaPredicted RBP9.09□□□□□ -0.95
CALD1-203ENST00000393118 ZNF581Q9P0T4 197 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 PRSS50Q9UI38 385 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
CALD1-203ENST00000393118 CADP27708 2225 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 DOCK10Q96BY6 2186 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 NKX2-6A6NCS4 301 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 SCTP09683 121 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 DTYMKP23919 212 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 RNPS1Q15287 305 aaKnown RBP9.09□□□□□ -0.95
CALD1-203ENST00000393118 TESK1Q15569 626 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 ALKBH6Q3KRA9 238 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 DEFB124Q8NES8 71 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 TMEM230Q96A57 120 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 TECTBQ96PL2 329 aa9.09□□□□□ -0.95
CALD1-203ENST00000393118 CEBPZOSA8MTT3 80 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 CDRT15L2A8MXV6 281 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 H0YIZ8 118 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 H7BYZ3 331 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 MPPED1O15442 326 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 SYNGR1O43759 233 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 GPR137BO60478 399 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 CTXN2P0C2S0 81 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 TRGC1P0CF51 173 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 NUTF2P61970 127 aaKnown RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 SPANXN5Q5MJ07 72 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 NABP1Q96AH0 204 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 OSGIN2Q9Y236 505 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 TMED3Q9Y3Q3 217 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 NTN3O00634 580 aaPredicted RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 OR3A1P47881 315 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 NOVA1P51513 510 aaKnown RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 RPS16P62249 146 aaKnown RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 QRFPP83859 136 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 DEFB109BQ30KR1 87 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 RAB24Q969Q5 203 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 MARS2Q96GW9 593 aaKnown RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 MRPL37Q9BZE1 423 aaKnown RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 FAM117AQ9C073 453 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 GNG12Q9UBI6 72 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 LIPGQ9Y5X9 500 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 FREM1Q5H8C1 2179 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 ZFHX2Q9C0A1 2572 aaPredicted RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 CDIPTO14735 213 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 ANOS1P23352 680 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 FHITP49789 147 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 FOXG1P55316 489 aaPredicted RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 SOX8P57073 446 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 SELENOVP59797 346 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 LCN15Q6UWW0 184 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 OR2C3Q8N628 320 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 OR5C1Q8NGR4 320 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 RFESDQ8TAC1 157 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 POLDIP2Q9Y2S7 368 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms