RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 B9D1Q9UPM9 204 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 ENTPD2Q9Y5L3 495 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 SCN2AQ99250 2005 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 CEP350Q5VT06 3117 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 ARPC3O15145 178 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 TLX3O43711 291 aaPredicted RBP6.65□□□□□ -1.34
VTI1A-201ENST00000393077 CLEC3AO75596 197 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 COX5AP20674 150 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 HSD52Q0P140 79 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 KIAA1644Q3SXP7 199 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 LIAT1Q6ZQX7 453 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 Q6ZWC4 215 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 WDR5BQ86VZ2 330 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 OR13G1Q8NGZ3 307 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 LYPD6BQ8NI32 183 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 WFDC1Q9HC57 220 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 A0A1W2PR80 420 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 C11orf94C9JXX5 98 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 PAGE4O60829 102 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF205O95201 554 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 PFN1P07737 140 aaKnown RBP6.65□□□□□ -1.34
VTI1A-201ENST00000393077 PTGER4P35408 488 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 RPEL1Q2QD12 228 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 SPANXN5Q5MJ07 72 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM215Q68D42 235 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 SAXO1Q8IYX7 474 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 FGF11Q92914 225 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 TSPAN32Q96QS1 320 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 ANAPC13Q9BS18 74 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 PECRQ9BY49 303 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 PKIBQ9C010 78 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF576Q9H609 170 aa6.65□□□□□ -1.34
VTI1A-201ENST00000393077 SOCS1O15524 211 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 LDB3O75112 727 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 CA1P00915 261 aaPredicted RBP6.65□□□□□ -1.35
VTI1A-201ENST00000393077 RRADP55042 308 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 INSM1Q01101 510 aaPredicted RBP6.65□□□□□ -1.35
VTI1A-201ENST00000393077 STPG1Q5TH74 334 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 HLA-DQA1Q5Y7H0 255 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 BOD1L2Q8IYS8 172 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 OR10G4Q8NGN3 311 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 PTX4Q96A99 478 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 KCNIP2Q9NS61 270 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 RPRMQ9NS64 109 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 HRASLS2Q9NWW9 162 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 SS18L2Q9UHA2 77 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 HEBP2Q9Y5Z4 205 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 LYL1P12980 280 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 IL9P15248 144 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 OTX1P32242 354 aaPredicted RBP6.65□□□□□ -1.35
VTI1A-201ENST00000393077 GGTLC2Q14390 218 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 C1QL3Q5VWW1 255 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 LINC00346Q8IVM7 164 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 FAM19A2Q8N3H0 131 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 OR10AG1Q8NH19 301 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 OTOSQ8NHW6 89 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 WFDC12Q8WWY7 111 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 FGF14Q92915 247 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 CNRIP1Q96F85 164 aaPredicted RBP6.65□□□□□ -1.35
VTI1A-201ENST00000393077 MRAP2Q96G30 205 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 RPP25Q9BUL9 199 aaKnown RBP6.65□□□□□ -1.35
VTI1A-201ENST00000393077 PLEKHA3Q9HB20 300 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 TMEM38BQ9NVV0 291 aa6.65□□□□□ -1.35
VTI1A-201ENST00000393077 PPIAL4CA0A0B4J2A2 164 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 MUC21A0A0G2JKD1 596 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 MUC21A0A140T8X8 626 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 TMEM250H0YL14 139 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 CA2P00918 260 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 TNFP01375 233 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 PPIAL4GP0DN37 164 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 IAPPP10997 89 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 PNMTP11086 282 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 PRSS53Q2L4Q9 553 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 COX19Q49B96 90 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 DEFB134Q4QY38 66 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 MUC21Q5SSG8 566 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 BRICD5Q6PL45 260 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 CDC20BQ86Y33 519 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 OR2V1Q8NHB1 315 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 C11orf40Q8WZ69 217 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 GMPPAQ96IJ6 420 aaPredicted RBP6.64□□□□□ -1.35
VTI1A-201ENST00000393077 PILRBQ9UKJ0 227 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 A0A0G2JMM0 328 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 UBE2L5PA0A1B0GUS4 154 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 A0A1W2PPB8 328 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 KIR3DP1A8MWS1 328 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 ADAM20O43506 726 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 CHST1O43916 411 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 UPK3AO75631 287 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 MMP23AO75900 390 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 NDUFB8O95169 186 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 VSIG8P0DPA2 414 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 FUT6P51993 359 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 MLC1Q15049 377 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 SLC48A1Q6P1K1 146 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 SFTPA1Q8IWL2 248 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 OR2A5Q96R48 311 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms