RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IGHV3OR15-7A0A075B7D8 119 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 C13orf42A0A1B0GVH6 325 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 CXCL2P19875 107 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 GABRA2P47869 451 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 SNTB1Q13884 538 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 EFNB3Q15768 340 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 BEX5Q5H9J7 111 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF818PQ6ZRF7 136 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 METTL8Q9H825 291 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR1A1Q9P1Q5 309 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 PPP1R3CQ9UQK1 317 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 FXYD6-FXYD2A0A087WZ82 144 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 MPPED1O15442 326 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 HEXAP06865 529 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 SLC25A4P12235 298 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 C4BPBP20851 252 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 APOBEC3AP31941 199 aaPredicted RBP9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 TFF3Q07654 80 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 KIAA2026Q5HYC2 2103 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 C11orf87Q6NUJ2 197 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM65Q6PI78 240 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 LURAP1Q96LR2 239 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 RNF115Q9Y4L5 304 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 HCFC1P51610 2035 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 PKD1L2Q7Z442 2459 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 DSCAMO60469 2012 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 TUBAL3A6NHL2 446 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 C12orf77C9JDV5 145 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 L7N2F9 121 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 MGST3O14880 152 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 ARPC5O15511 151 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 IRF2P14316 349 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 RPA2P15927 270 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 CD80P33681 288 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 CCL8P80075 99 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 TEX36Q5VZQ5 186 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 TRAT1Q6PIZ9 186 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 LIAT1Q6ZQX7 453 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 PRR18Q8N4B5 295 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 GLYATL2Q8WU03 294 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 NEUROG1Q92886 237 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 GALMQ96C23 342 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 MSI2Q96DH6 328 aaKnown RBP9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 C2orf50Q96LR7 162 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 EGLN1Q9GZT9 426 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 TOLLIPQ9H0E2 274 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 COL6A6A6NMZ7 2263 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 ADGRG4Q8IZF6 3080 aa9.57□□□□□ -0.88
SMARCAL1-203ENST00000392128 C3orf85A0A1B0GTC6 90 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 B8ZZF3 427 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 K7N7A8 449 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 HSPA12AO43301 675 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 CYB5R3P00387 301 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 HOXB5P09067 269 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 MUC1P15941 1255 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 SSTR2P30874 369 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 GLIPR1P48060 266 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 SP6Q3SY56 376 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 STUMQ69YW2 141 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 TBC1D26Q86UD7 250 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 CMTM1Q8IZ96 169 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF561Q8N587 486 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 BVESQ8NE79 360 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR10V1Q8NGI7 309 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 SDSLQ96GA7 329 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR10C1Q96KK4 312 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 DNTTIP1Q9H147 329 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 HEXA-AS1Q9H8Q6 139 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 CCL28Q9NRJ3 127 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 RDH8Q9NYR8 311 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 RAI1Q7Z5J4 1906 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 TANC2Q9HCD6 1990 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 LRRC30A6NM36 301 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 B9A039 149 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 HSD17B6O14756 317 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 PHF1O43189 567 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 SIAH2O43255 324 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 TSC22D2O75157 780 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 MPC2O95563 127 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 PSMB6P28072 239 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 SRPXP78539 464 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 IL15RAQ13261 267 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 FAM201AQ5SY85 155 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 LGI3Q8N145 548 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR1L1Q8NH94 360 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 MRGPRDQ8TDS7 321 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 C18orf12Q96KH6 178 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 TP53RKQ96S44 253 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 MS4A5Q9H3V2 200 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 NCOR1P1Q9H4R4 102 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 SAP30LQ9HAJ7 183 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 MAB21L2Q9Y586 359 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 NBEAQ8NFP9 2946 aa9.56□□□□□ -0.88
SMARCAL1-203ENST00000392128 DIDO1Q9BTC0 2240 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 IFNA21P01568 189 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 HBZP02008 142 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 WNT2P09544 360 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 S100GP29377 79 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms