RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 HIST1H2BMQ99879 126 aa17.92■□□□□ 0.46
COL23A1-201ENST00000390654 SSX3Q99909 188 aa17.92■□□□□ 0.46
COL23A1-201ENST00000390654 EP300Q09472 2414 aaPredicted RBP17.91■□□□□ 0.46
COL23A1-201ENST00000390654 MMP9P14780 707 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 HOXA5P20719 270 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 SSX7Q7RTT5 188 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 KDF1Q8NAX2 398 aaPredicted RBP17.91■□□□□ 0.46
COL23A1-201ENST00000390654 RHOVQ96L33 236 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 NAPSAO96009 420 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 STX12Q86Y82 276 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 ATP5SQ99766 215 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 C1QTNF5Q9BXJ0 243 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 PLA2G3Q9NZ20 509 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 CACNG5Q9UF02 275 aa17.91■□□□□ 0.46
COL23A1-201ENST00000390654 RHBDL1O75783 438 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 SOD3P08294 240 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 UCP1P25874 307 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 TLE4Q04727 773 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 ARL16Q0P5N6 197 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 BEND4Q6ZU67 534 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 MKXQ8IYA7 352 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 ZDHHC23Q8IYP9 409 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 GNPNAT1Q96EK6 184 aaPredicted RBP17.9■□□□□ 0.46
COL23A1-201ENST00000390654 PLSCR2Q9NRY7 297 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 CD200P41217 278 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 FGF12P61328 243 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 FAM185AQ8N0U4 392 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 PSMF1Q92530 271 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 GAR1Q9NY12 217 aaKnown RBP17.9■□□□□ 0.46
COL23A1-201ENST00000390654 KCNS2Q9ULS6 477 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 RNF115Q9Y4L5 304 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 MED12LQ86YW9 2145 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 SLC34A2O95436 690 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 LINC00696Q6ZRV3 163 aa17.9■□□□□ 0.46
COL23A1-201ENST00000390654 UNKLQ9H9P5 680 aaKnown RBP17.9■□□□□ 0.46
COL23A1-201ENST00000390654 IFNA5P01569 189 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 F2RP25116 425 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 CDX1P47902 265 aaPredicted RBP17.89■□□□□ 0.45
COL23A1-201ENST00000390654 TAS2R30P59541 319 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 HOXA4Q00056 320 aaPredicted RBP17.89■□□□□ 0.45
COL23A1-201ENST00000390654 LINC00469Q8N7U9 141 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 NECAP1Q8NC96 275 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 ADGRG7Q96K78 797 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 KRTAP27-1Q3LI81 207 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 OR2T2Q6IF00 324 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 TIPARPQ7Z3E1 657 aaKnown RBP17.89■□□□□ 0.45
COL23A1-201ENST00000390654 ZNF295-AS1Q8N0V1 137 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 OR10J5Q8NHC4 309 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 PLK3Q9H4B4 646 aa17.89■□□□□ 0.45
COL23A1-201ENST00000390654 WDR1O75083 606 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 FABP4P15090 132 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 HLA-DRB3P79483 266 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 PCSK4Q6UW60 755 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 PPP1R32Q7Z5V6 425 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 HIST1H2AAQ96QV6 131 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 REPIN1Q9BWE0 567 aaKnown RBP17.88■□□□□ 0.45
COL23A1-201ENST00000390654 ATP23Q9Y6H3 246 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 USF3Q68DE3 2245 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 SELEP16581 610 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 ZNF506Q5JVG8 444 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 SPANXN5Q5MJ07 72 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 ZNF787Q6DD87 383 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 ABLIM2Q6H8Q1 611 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 KCNE4Q8WWG9 221 aa17.88■□□□□ 0.45
COL23A1-201ENST00000390654 FRZBQ92765 325 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 THOC3Q96J01 351 aaKnown RBP17.87■□□□□ 0.45
COL23A1-201ENST00000390654 LRFN1Q9P244 771 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 TCFL5Q9UL49 500 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 CEBPZOSA8MTT3 80 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 NKX6-1P78426 367 aaPredicted RBP17.87■□□□□ 0.45
COL23A1-201ENST00000390654 OR8G2PQ6IF36 304 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 FAM53AQ6NSI3 398 aaPredicted RBP17.87■□□□□ 0.45
COL23A1-201ENST00000390654 MRPL30Q8TCC3 161 aaKnown RBP17.87■□□□□ 0.45
COL23A1-201ENST00000390654 SCGB1C1Q8TD33 95 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 ZNF391Q9UJN7 358 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 CNOT1A5YKK6 2376 aaKnown RBP17.87■□□□□ 0.45
COL23A1-201ENST00000390654 A0A1B0GW64 132 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 SIRPB1O00241 398 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 HSPB1P04792 205 aaKnown RBP17.87■□□□□ 0.45
COL23A1-201ENST00000390654 TRGC1P0CF51 173 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 CA6P23280 308 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 CYB561P49447 251 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 C12orf49Q9H741 205 aa17.87■□□□□ 0.45
COL23A1-201ENST00000390654 KIR2DS1A0A191URI9 304 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 TUBG1P23258 451 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 KIR2DS4P43632 304 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 KIR2DS1Q14954 304 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 ZNF726P1Q15940 193 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 CEACAM21Q3KPI0 293 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 PRO1933Q9H354 126 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 TRAV24A0A0B4J272 114 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 TUSC2O75896 110 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 GLIPR1P48060 266 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 WDR25Q64LD2 544 aaPredicted RBP17.86■□□□□ 0.45
COL23A1-201ENST00000390654 C1QL4Q86Z23 238 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 LILRB2Q8N423 598 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 ABHD5Q8WTS1 349 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 SPSB4Q96A44 273 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 S100PBPQ96BU1 408 aa17.86■□□□□ 0.45
COL23A1-201ENST00000390654 SNX22Q96L94 193 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms