RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 MEX3BQ6ZN04 569 aaKnown RBP21.15■□□□□ 0.98
SHOX2-201ENST00000389589 CD177Q8N6Q3 437 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 LHFPL5Q8TAF8 219 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 ST8SIA2Q92186 375 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 COQ2Q96H96 371 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 PIGBOS1A0A0B4J2F0 54 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 DUXBA0A1W2PPF3 345 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 PGLYRP1O75594 196 aaPredicted RBP21.14■□□□□ 0.98
SHOX2-201ENST00000389589 SPDEFO95238 335 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 CA7P43166 264 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 BSPH1Q075Z2 132 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 TESK1Q15569 626 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 KRBOX4Q5JUW0 171 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 TMEM268Q5VZI3 342 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 GALMQ96C23 342 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 AKR1E2Q96JD6 320 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 AQP10Q96PS8 301 aa21.14■□□□□ 0.98
SHOX2-201ENST00000389589 H0Y980 276 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 LHBP01229 141 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 WNT2P09544 360 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 GABRA2P47869 451 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 TNFAIP6P98066 277 aaPredicted RBP21.14■□□□□ 0.97
SHOX2-201ENST00000389589 ALKAL2Q6UX46 152 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 ZNF695Q8IW36 515 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 OR1S1Q8NH92 325 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 PPP1R35Q8TAP8 253 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 ERGIC1Q969X5 290 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 DNTTIP1Q9H147 329 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 METRNQ9UJH8 293 aa21.14■□□□□ 0.97
SHOX2-201ENST00000389589 IGHV1-46P01743 117 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 UCP1P25874 307 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 SLC35G3Q8N808 338 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 RRNAD1Q96FB5 475 aaKnown RBP21.13■□□□□ 0.97
SHOX2-201ENST00000389589 ZNF471Q9BX82 626 aaPredicted RBP21.13■□□□□ 0.97
SHOX2-201ENST00000389589 SHARPINQ9H0F6 387 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 CDS2O95674 445 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 ASCL1P50553 236 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 TRAT1Q6PIZ9 186 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 IL22RA2Q969J5 263 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 LURAP1Q96LR2 239 aa21.13■□□□□ 0.97
SHOX2-201ENST00000389589 IGKV1D-17A0A075B6S4 117 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 C12orf77C9JDV5 145 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 F5H0A9 414 aaPredicted RBP21.12■□□□□ 0.97
SHOX2-201ENST00000389589 DEDDO75618 318 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 F2RP25116 425 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 CEACAM6P40199 344 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 SPRNQ5BIV9 151 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 BOLLQ8N9W6 283 aaKnown RBP21.12■□□□□ 0.97
SHOX2-201ENST00000389589 OR5D13Q8NGL4 314 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 DIRC2Q96SL1 478 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 AUP1Q9Y679 476 aa21.12■□□□□ 0.97
SHOX2-201ENST00000389589 ZNF737O75373 536 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 IL2RGP31785 369 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 SELENOHQ8IZQ5 122 aaKnown RBP21.11■□□□□ 0.97
SHOX2-201ENST00000389589 PHYHIPLQ96FC7 376 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 SNX22Q96L94 193 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 WFIKKN1Q96NZ8 548 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 RNF7Q9UBF6 113 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 RBM7Q9Y580 266 aaKnown RBP21.11■□□□□ 0.97
SHOX2-201ENST00000389589 VSTM5A8MXK1 200 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 KCNAB3O43448 404 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 TFF1P04155 84 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 FOXRED2Q8IWF2 684 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 SPIN2AQ99865 258 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 SPIN2BQ9BPZ2 258 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 TOLLIPQ9H0E2 274 aa21.11■□□□□ 0.97
SHOX2-201ENST00000389589 ANKRD34BA5PLL1 514 aa21.1■□□□□ 0.97
SHOX2-201ENST00000389589 C1QTNF9P0C862 333 aa21.1■□□□□ 0.97
SHOX2-201ENST00000389589 ADIPOQQ15848 244 aa21.1■□□□□ 0.97
SHOX2-201ENST00000389589 OR1L1Q8NH94 360 aa21.1■□□□□ 0.97
SHOX2-201ENST00000389589 GCM1Q9NP62 436 aa21.1■□□□□ 0.97
SHOX2-201ENST00000389589 HBZP02008 142 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 ADH4P08319 380 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 GLIPR1P48060 266 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 UBALD1Q8TB05 177 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 Q8TCH9 128 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 RBPMSQ93062 196 aaKnown RBP21.09■□□□□ 0.97
SHOX2-201ENST00000389589 LSM5Q9Y4Y9 91 aaKnown RBP21.09■□□□□ 0.97
SHOX2-201ENST00000389589 ICE1Q9Y2F5 2266 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 MGST3O14880 152 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 TNFSF12O43508 249 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 SCGB1D2O95969 90 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 MBPP02686 304 aaPredicted RBP21.09■□□□□ 0.97
SHOX2-201ENST00000389589 OR4A8P0C604 315 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 STOML3Q8TAV4 291 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 FAM222BQ8WU58 562 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 CITED4Q96RK1 184 aa21.09■□□□□ 0.97
SHOX2-201ENST00000389589 POLEQ07864 2286 aa21.08■□□□□ 0.97
SHOX2-201ENST00000389589 MRGPRDQ8TDS7 321 aa21.08■□□□□ 0.97
SHOX2-201ENST00000389589 ESRP2Q9H6T0 727 aaKnown RBP21.08■□□□□ 0.97
SHOX2-201ENST00000389589 MSGN1A6NI15 193 aa21.08■□□□□ 0.96
SHOX2-201ENST00000389589 LEUTXA8MZ59 168 aa21.08■□□□□ 0.96
SHOX2-201ENST00000389589 PCNPQ8WW12 178 aaKnown RBP21.08■□□□□ 0.96
SHOX2-201ENST00000389589 NINJ1Q92982 152 aa21.08■□□□□ 0.96
SHOX2-201ENST00000389589 GPHA2Q96T91 129 aa21.08■□□□□ 0.96
SHOX2-201ENST00000389589 PLEKHA2Q9HB19 425 aa21.08■□□□□ 0.96
SHOX2-201ENST00000389589 DYSFO75923 2080 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 IGHV3OR15-7A0A075B7D8 119 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 E5RGE8 158 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 K7EPK0 472 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms