RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 IL19Q9UHD0 177 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNF107Q9UII5 783 aaPredicted RBP11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 F6UZH7 168 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 HBZP02008 142 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 HTD2P86397 168 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 FOXF2Q12947 444 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 LYZL2Q7Z4W2 148 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 GGNQ86UU5 652 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 OR5M8Q8NGP6 311 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 OR5C1Q8NGR4 320 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 TMEM231Q9H6L2 316 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 SCN8AQ9UQD0 1980 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 hCG_38984A0A1B0GV85 526 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 COX5AP20674 150 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 KCNMB1Q16558 191 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 FAHD2BQ6P2I3 314 aaPredicted RBP11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 SLC25A42Q86VD7 318 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 OR2C3Q8N628 320 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 ZIC4Q8N9L1 334 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 MISP3Q96FF7 219 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 FAHD2AQ96GK7 314 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 ABHD14BQ96IU4 210 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 HELZP42694 1942 aaKnown RBP11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 PRR32B1ATL7 298 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 SLC25A6P12236 298 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 OPRK1P41145 380 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 RAB5BP61020 215 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
PTPRN2-202ENST00000389416 WNT9BO14905 357 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 BCL2L11O43521 198 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 SMPD2O60906 423 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 PSG7Q13046 419 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 TNXAQ16473 311 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 ASB13Q8WXK3 278 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 NIPSNAP3BQ9BS92 247 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 GBF1Q92538 1859 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 ATRXP46100 2492 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 HEATR5AQ86XA9 2040 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 LOC390937A0A1W2PQ73 354 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 CLEC3BP05452 202 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 CLEC9AQ6UXN8 241 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 UQCC1Q9NVA1 299 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 SOX15O60248 233 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 PDGFAP04085 211 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 MGST1P10620 155 aaKnown RBP11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 BSPH1Q075Z2 132 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNF154Q13106 437 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 ACTR3CQ9C0K3 210 aaPredicted RBP11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 VSIG4Q9Y279 399 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 RRASP10301 218 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 OR2B8PP59922 312 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNF485Q8NCK3 441 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 GPHA2Q96T91 129 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 MED9Q9NWA0 146 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 HIF1ANQ9NWT6 349 aa11.24□□□□□ -0.61
PTPRN2-202ENST00000389416 CDK2AP1O14519 115 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 BRS3P32247 399 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 ADIRFQ15847 76 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 OR1L1Q8NH94 360 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 Q96M66 194 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 NOTCH3Q9UM47 2321 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 A0A1B0GTI1 187 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 ODAMA1E959 279 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 KRBOX1C9JBD0 128 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 CD37P11049 281 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 SSTP61278 116 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 SEZ6L2Q6UXD5 910 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 CALHM1Q8IU99 346 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 C1orf162Q8NEQ5 155 aaPredicted RBP11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 RHBDL1O75783 438 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 RBP4P02753 201 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 FGF2P09038 288 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 F2RP25116 425 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 GAS1P54826 345 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 GFRA1P56159 465 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 LFNGQ8NES3 379 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 FGFBP3Q8TAT2 258 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 SNX22Q96L94 193 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNF714Q96N38 554 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 PIPOXQ9P0Z9 390 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 TMEM14DPA8MWL7 114 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 C1orf196B1AJZ1 125 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 F2RL2O00254 374 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 SYNGR2O43760 224 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 APELAP0DMC3 54 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 PSG2P11465 335 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 G6PCP35575 357 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 THBS3P49746 956 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms