RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 C9orf78Q9NZ63 289 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 EHFQ9NZC4 300 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR5AC2Q9NZP5 309 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 NOL12Q9UGY1 213 aaKnown RBP eCLIP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CFAP45Q9UL16 551 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC9A8Q9Y2E8 581 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 PTPRGP23470 1445 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 KDM5BQ9UGL1 1544 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 TOGARAM1Q9Y4F4 1720 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 LOC389332A0A1B0GUA5 103 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 A0A1B0GVL5 298 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 DUXBA0A1W2PPF3 345 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 HEATR9A2RTY3 570 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAPPC13A5PLN9 417 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 C11orf86A6NJI1 115 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 MEI4A8MW99 385 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 GGTLC3B5MD39 225 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 KBTBD13C9JR72 458 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 MKRN2OSH3BPM6 223 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 PHYHO14832 338 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 TSPAN2O60636 221 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC16A7O60669 478 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 HYPMO75409 117 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC25A14O95258 325 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 FADS2O95864 444 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 HAND1O96004 215 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CST1P01037 141 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CDK1P06493 297 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 MCF2P10911 925 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 PRPS2P11908 318 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CCNA2P20248 432 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CYP3A5P20815 502 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 KITLGP21583 273 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CASP1P29466 404 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 GCHFRP30047 84 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 S100A5P33763 92 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 ACADVLP49748 655 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 RND2P52198 227 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 RAB14P61106 215 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 POLR2FP61218 127 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CALD1Q05682 793 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 PPP1R8Q12972 351 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 STX3Q13277 289 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 DGCR6Q14129 220 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 DIAPH2-AS1Q14236 149 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 KISS1Q15726 138 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 PDZD11Q5EBL8 140 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 TTC32Q5I0X7 151 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 C1orf141Q5JVX7 400 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 Q6ZRG5 221 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 RGS9BPQ6ZS82 235 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 FA2HQ7L5A8 372 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 COPS6Q7L5N1 327 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 APTXQ7Z2E3 356 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 LINC00269Q8N2A0 174 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 ZNF713Q8N859 430 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 IQUBQ8NA54 791 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR52E4Q8NGH9 312 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR4D6Q8NGJ1 314 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 GOLGA5Q8TBA6 731 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC25A40Q8TBP6 338 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 THRSPQ92748 146 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 DMAC1Q96GE9 116 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CAPNS2Q96L46 248 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 METTL26Q96S19 204 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC35A5Q9BS91 424 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 MTG1Q9BT17 334 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 SUCNR1Q9BXA5 334 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 AICDAQ9GZX7 198 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 YAE1D1Q9NRH1 226 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 CDC42SE1Q9NRR8 79 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 NHP2Q9NX24 153 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 METTL1Q9UBP6 276 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 ENOPH1Q9UHY7 261 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 KIF25Q9UIL4 384 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 FBXL3Q9UKT7 428 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 PPIEQ9UNP9 301 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 MRPS2Q9Y399 296 aaKnown RBP-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 KIF3AQ9Y496 699 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 DIP2CQ9Y2E4 1556 aa-1.9□□□□□ -2.71
RNU6-540P-201ENST00000384622 NFAT5O94916 1531 aa-1.91□□□□□ -2.71
RNU6-540P-201ENST00000384622 DOT1LQ8TEK3 1739 aa-1.91□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAV12-3A0A0B4J271 114 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRAV25A0A0B4J276 109 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 A0A1W2PNV4 684 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 hCG_1809904A0A1W2PP81 198 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 A0A1W2PPE2 198 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 A0A1W2PR64 198 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 A0A1W2PRV1 198 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TLCD2A6NGC4 264 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GGT3PA6NGU5 568 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR52A4PA6NMU1 304 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ZNF705FA8MVS1 300 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GOLGA8SH3BPF8 625 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 UBFD1O14562 309 aaKnown RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TOR1AO14656 332 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TP53I11O14683 189 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ITGB1BP1O14713 200 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 HSD17B6O14756 317 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 BCE1O60756 84 aa-1.91□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms