RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 TSEN15Q8WW01 171 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1040P-201ENST00000383974 PLIN2Q99541 437 aa-0.45□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CDCA4Q9BXL8 241 aa-0.45□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CRLF2Q9HC73 371 aa-0.45□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CACNA1EQ15878 2313 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 C9J4A7 227 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 UBFD1O14562 309 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 ZNF3P17036 446 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 PMCHP20382 165 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 SLC35B1P78383 322 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CHCHD2P9Q5T1J5 151 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 TMEM42Q69YG0 159 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 RASL11AQ6T310 242 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 FAM19A3Q7Z5A8 133 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CMTM8Q8IZV2 173 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 GATD1Q8NB37 220 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 OR5J2Q8NH18 312 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 DNAJC27Q9NZQ0 273 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 ZMAT5Q9UDW3 170 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 FAM215AQ9Y5M1 114 aa-0.46□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CUL9Q8IWT3 2517 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 K7EQS6 105 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 GEMIN2O14893 280 aaKnown RBP-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 EMX1Q04741 257 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CLEC20AQ6ZU45 233 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 BZW1Q7L1Q6 419 aaKnown RBP-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 OR2W3Q7Z3T1 314 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 RPS19BP1Q86WX3 136 aaKnown RBP-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 CYGBQ8WWM9 190 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 MND1Q9BWT6 205 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 TBL2Q9Y4P3 447 aaKnown RBP-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 EML5Q05BV3 1969 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 ADAMTSL3P82987 1691 aa-0.47□□□□□ -2.48
RNU6-1040P-201ENST00000383974 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 PTPRBP23467 1997 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 ZNF593O00488 134 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 RPSAP08865 295 aaKnown RBP-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 ZNF728P0DKX0 622 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 TAS2R60P59551 318 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 TMEM258P61165 79 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 IFFO1Q0D2I5 559 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 PDGFRLQ15198 375 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 LRRC75BQ2VPJ9 315 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 ZNF439Q8NDP4 499 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 OR51Q1Q8NH59 317 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 NAT6Q93015 286 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 BPIFA3Q9BQP9 254 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 CCDC77Q9BR77 488 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 CST9LQ9H4G1 147 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 C11orf1Q9H5F2 150 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 AHSPQ9NZD4 102 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 SCML1Q9UN30 329 aa-0.48□□□□□ -2.49
RNU6-1040P-201ENST00000383974 DMBT1Q9UGM3 2413 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 MDFIC2A0A1B0GVS7 189 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 DNAJB6O75190 326 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 CIAO1O76071 339 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 ESDP10768 282 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 PPP1CCP36873 323 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 TSPEAR-AS2P59090 65 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 RAB2AP61019 212 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 RHOAP61586 193 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 MGAT3Q09327 533 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 Q1T7F1 81 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 OR10K2Q6IF99 312 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 OLIG3Q7RTU3 272 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 LHFPL1Q86WI0 220 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 DYNAPQ8N1N2 210 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 CA13Q8N1Q1 262 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 Q8N6K4 173 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 TFGQ92734 400 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 FAAP24Q9BTP7 215 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 NXF2Q9GZY0 626 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 CHRNA10Q9GZZ6 450 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 VCX3BQ9H321 246 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 GLS2Q9UI32 602 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 TNCP24821 2201 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 ZNF462Q96JM2 2506 aa-0.49□□□□□ -2.49
RNU6-1040P-201ENST00000383974 BRWD1Q9NSI6 2320 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 PDCD6O75340 191 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 LIPCP11150 499 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 SLC2A1P11166 492 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 RPS5P46782 204 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 GCLMP48507 274 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 MP68P56378 58 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 CTBP2P56545 445 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 SLC35A2P78381 396 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 HMGN5P82970 282 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 GBE1Q04446 702 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 EBLN2Q6P2I7 272 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 SLC35E3Q7Z769 313 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 MICU2Q8IYU8 434 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 CLHC1Q8NHS4 586 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 BIRC8Q96P09 236 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 APOL4Q9BPW4 351 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 MRPL57Q9BQC6 102 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 NRBP2Q9NSY0 501 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 HHLA3Q9XRX5 114 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 SNURFQ9Y675 71 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 ATAD2BQ9ULI0 1458 aa-0.5□□□□□ -2.49
RNU6-1040P-201ENST00000383974 A0A1W2PRF3 423 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms