RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CDH23Q9H251 3354 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 ZFYVE26Q68DK2 2539 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 TTRP02766 147 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 HOXA6P31267 233 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 PSG4Q00888 419 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 PDLIM3Q53GG5 364 aaPredicted RBP16.34■□□□□ 0.21
CSPG5-202ENST00000383738 SPINK9Q5DT21 86 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 RNF133Q8WVZ7 376 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 MS4A10Q96PG2 267 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 AUP1Q9Y679 476 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 COLCA2A8K830 154 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 TRGC1P0CF51 173 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 MMP16P51512 607 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 TAS2R30P59541 319 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 PKIAP61925 76 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 FAHD2BQ6P2I3 314 aaPredicted RBP16.34■□□□□ 0.21
CSPG5-202ENST00000383738 DEGS2Q6QHC5 323 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 ZNF573Q86YE8 665 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 ARHGEF39Q8N4T4 335 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 FAHD2AQ96GK7 314 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 CARHSP1Q9Y2V2 147 aaKnown RBP16.34■□□□□ 0.21
CSPG5-202ENST00000383738 CBY1Q9Y3M2 126 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 PCDH15Q96QU1 1955 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 C2orf16Q68DN1 1984 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 MDFIC2A0A1B0GVS7 189 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 PRR19A6NJB7 356 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 CDX4O14627 284 aaPredicted RBP16.34■□□□□ 0.21
CSPG5-202ENST00000383738 NDUFA2O43678 99 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 PRF1P14222 555 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 MDP1Q86V88 176 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 RNF126Q9BV68 326 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 DEPPQ9NTK1 212 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 METTL1Q9UBP6 276 aaKnown RBP16.34■□□□□ 0.21
CSPG5-202ENST00000383738 STARD10Q9Y365 291 aa16.34■□□□□ 0.21
CSPG5-202ENST00000383738 DENND4CQ5VZ89 1909 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 TRBV5-7A0A0A0MS05 114 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 IZUMO4Q1ZYL8 232 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 HOGA1Q86XE5 327 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 VPS25Q9BRG1 176 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 FAM117AQ9C073 453 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 OR2J1Q9GZK6 312 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 CHRNA10Q9GZZ6 450 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 LPAR5Q9H1C0 372 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 PLEKHF2Q9H8W4 249 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 DMRT1Q9Y5R6 373 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 RFNGQ9Y644 331 aa16.33■□□□□ 0.21
CSPG5-202ENST00000383738 CHST1O43916 411 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 TMEM127O75204 238 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 NUFIP2Q7Z417 695 aaKnown RBP16.33■□□□□ 0.2
CSPG5-202ENST00000383738 DMBX1Q8NFW5 382 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 KCNK17Q96T54 332 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 PECRQ9BY49 303 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 OR2H1Q9GZK4 316 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 NAA60Q9H7X0 242 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 IGLV1-36A0A0B4J1U3 117 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 SERPINE3A8MV23 424 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 CST2P09228 141 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 CALCRP30988 508 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF133P52736 654 aaPredicted RBP16.33■□□□□ 0.2
CSPG5-202ENST00000383738 AP1S3Q96PC3 154 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 ZDHHC11Q9H8X9 412 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 SLC2A9Q9NRM0 540 aa16.33■□□□□ 0.2
CSPG5-202ENST00000383738 ZIC3O60481 467 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 MBPP02686 304 aaPredicted RBP16.32■□□□□ 0.2
CSPG5-202ENST00000383738 CDX1P47902 265 aaPredicted RBP16.32■□□□□ 0.2
CSPG5-202ENST00000383738 EWSR1Q01844 656 aaKnown RBP eCLIP16.32■□□□□ 0.2
CSPG5-202ENST00000383738 OR5I1Q13606 314 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 ADPRHL1Q8NDY3 354 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 POC1BQ8TC44 478 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 NTN3O00634 580 aaPredicted RBP16.32■□□□□ 0.2
CSPG5-202ENST00000383738 PPP1CBP62140 327 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 RTL6Q6ICC9 239 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 ABHD14AQ9BUJ0 271 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 ANXA10Q9UJ72 324 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 PGA3P0DJD8 388 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF708P17019 499 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 GALR1P47211 349 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 LHFPL2Q6ZUX7 228 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 OR1K1Q8NGR3 316 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 OR10J5Q8NHC4 309 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF552Q9H707 407 aaPredicted RBP16.32■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF665Q9H7R5 613 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 B3GAT1Q9P2W7 334 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 LHFPL6Q9Y693 200 aa16.32■□□□□ 0.2
CSPG5-202ENST00000383738 FUT6P51993 359 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 FBXW9Q5XUX1 488 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 BIVMQ86UB2 503 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 OR10V1Q8NGI7 309 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 LRFN3Q9BTN0 628 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF729A6NN14 1252 aaPredicted RBP16.31■□□□□ 0.2
CSPG5-202ENST00000383738 PTGER4P35408 488 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 PCP4P48539 62 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF92Q03936 586 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF90Q03938 601 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 SPNS3Q6ZMD2 512 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 OR52M1Q8NGK5 317 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 RSG1Q9BU20 258 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 TRIOO75962 3097 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 IGHV3-43A0A0B4J1X8 118 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 MPPED1O15442 326 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms