RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 NABP2Q9BQ15 211 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 DPCDQ9BVM2 203 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-203ENST00000380748 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 MNAT1P51948 309 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 ZNF134P52741 427 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 IL13RA2Q14627 380 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 KISS1Q15726 138 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 ELP2Q6IA86 826 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 GID4Q8IVV7 300 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 SUMF2Q8NBJ7 301 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 ZNF439Q8NDP4 499 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 OR10K1Q8NGX5 313 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 PRRG3Q9BZD7 231 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 FRRS1LQ9P0K9 344 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 FOXA2Q9Y261 457 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-203ENST00000380748 CEPT1Q9Y6K0 416 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
HMGN1-203ENST00000380748 RGS11O94810 467 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 BRI3O95415 125 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 ISG15P05161 165 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 NANOS3P60323 173 aaKnown RBP13.21□□□□□ -0.29
HMGN1-203ENST00000380748 LRRC36Q1X8D7 754 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 CT45A1Q5HYN5 189 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 LPCAT4Q643R3 524 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 LINC00322Q6ZN03 302 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-203ENST00000380748 FAM220AQ7Z4H9 259 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 GTSCR1Q86UQ5 136 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 RPP25LQ8N5L8 163 aaKnown RBP13.21□□□□□ -0.29
HMGN1-203ENST00000380748 CT45A3Q8NHU0 189 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 CCDC107Q8WV48 283 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 CANT1Q8WVQ1 401 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 FAM107BQ9H098 131 aa13.21□□□□□ -0.29
HMGN1-203ENST00000380748 TMEM30CPA0ZSE6 113 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 NBR2O15453 112 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 EPHA2P29317 976 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-203ENST00000380748 ZNF85Q03923 595 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 RAB40BQ12829 278 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 ZNF691Q5VV52 312 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 LIN54Q6MZP7 749 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 FAHD1Q6P587 224 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 OR10V1Q8NGI7 309 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 LRGUKQ96M69 825 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 MS4A10Q96PG2 267 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 ZNF251Q9BRH9 671 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 PLEKHA3Q9HB20 300 aa13.2□□□□□ -0.3
HMGN1-203ENST00000380748 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
HMGN1-203ENST00000380748 H0Y980 276 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 LANCL1O43813 399 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 FSTP19883 344 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 DAPP51397 102 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 Q3ZCU0 254 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 C12orf73Q69YU5 71 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 IL34Q6ZMJ4 242 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 PXT1Q8NFP0 134 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 DNAJC9Q8WXX5 260 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 CCDC124Q96CT7 223 aaKnown RBP13.19□□□□□ -0.3
HMGN1-203ENST00000380748 RHOVQ96L33 236 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 CST11Q9H112 138 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
HMGN1-203ENST00000380748 ARPC1BO15143 372 aaKnown RBP13.18□□□□□ -0.3
HMGN1-203ENST00000380748 ORC5O43913 435 aa13.18□□□□□ -0.3
HMGN1-203ENST00000380748 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-203ENST00000380748 TPPP2P59282 170 aa13.18□□□□□ -0.3
HMGN1-203ENST00000380748 TNFAIP8L1Q8WVP5 186 aa13.18□□□□□ -0.3
HMGN1-203ENST00000380748 ST6GALNAC5Q9BVH7 336 aa13.18□□□□□ -0.3
HMGN1-203ENST00000380748 MRPL20Q9BYC9 149 aaKnown RBP13.18□□□□□ -0.3
HMGN1-203ENST00000380748 GNG12Q9UBI6 72 aa13.18□□□□□ -0.3
HMGN1-203ENST00000380748 SHISA3A0PJX4 238 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 IZUMO1RA6ND01 250 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 ZAR1LA6NP61 321 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 GABRPO00591 440 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 SULT1B1O43704 296 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 SNX3O60493 162 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 MITFO75030 526 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-203ENST00000380748 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-203ENST00000380748 CSTBP04080 98 aaKnown RBP13.17□□□□□ -0.3
HMGN1-203ENST00000380748 ARHGAP24Q8N264 748 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 TCTEX1D1Q8N7M0 179 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 NPBQ8NG41 125 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 ASB9Q96DX5 294 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-203ENST00000380748 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
HMGN1-203ENST00000380748 ABCA13Q86UQ4 5058 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 NDUFA3O95167 84 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 HTR3BO95264 441 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 CX3CL1P78423 397 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 PMS2P11Q13670 270 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 RSU1Q15404 277 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 ZNF660Q6AZW8 331 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-203ENST00000380748 LCN12Q6JVE5 192 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 PYHIN1Q6K0P9 492 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 FDX2Q6P4F2 183 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 OR9G4Q8NGQ1 327 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 FAM192AQ9GZU8 254 aa13.16□□□□□ -0.3
HMGN1-203ENST00000380748 IFT22Q9H7X7 185 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms