RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 KIRREL1Q96J84 757 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 PARP12Q9H0J9 701 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 RCL1Q9Y2P8 373 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 NSG2Q9Y328 171 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 UBE2J1Q9Y385 318 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 TMED3Q9Y3Q3 217 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 TRAV17A0A0B4J275 112 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 RAB19A4D1S5 217 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 GPR31O00270 319 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 OR2H2O95918 312 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 GRPP07492 148 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CEBPDP49716 269 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ERVK11-1P61568 191 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 IL13RA2Q14627 380 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF324BQ6AW86 544 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF880Q6PDB4 577 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CXorf67Q86X51 503 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 PRR18Q8N4B5 295 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 WDR31Q8NA23 367 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 IL1F10Q8WWZ1 152 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 SMIM8Q96KF7 97 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ADAT1Q9BUB4 502 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 RTL8AQ9BWD3 113 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 BCL2L14Q9BZR8 327 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 OR1A1Q9P1Q5 309 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 NDUFS8O00217 210 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 AQP7O14520 342 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 MED6O75586 246 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 LINC00596Q86U02 117 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 KLF14Q8TD94 323 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 TMEM56Q96MV1 263 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 PLEKHA2Q9HB19 425 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 SPACA1Q9HBV2 294 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 DKK4Q9UBT3 224 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 FZR1Q9UM11 496 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM96BQ9Y3D0 163 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 TMEM56-RWDD3S4R434 201 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 CADP27708 2225 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 TRBV6-6A0A0A6YYG2 114 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 TMEM218A2RU14 115 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 LRP5LA4QPB2 252 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 SLC33A1O00400 549 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 ST8SIA3O43173 380 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 PGLYRP1O75594 196 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 NXPH3O95157 252 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 CDS2O95674 445 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 RND3P61587 244 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 MRPL49Q13405 166 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 CXorf66Q5JRM2 361 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 INO80CQ6PI98 192 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF826PQ6ZT77 177 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF695Q8IW36 515 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 GTF3AQ92664 365 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 ARL11Q969Q4 196 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 MAGT1Q9H0U3 335 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 ZFAND3Q9H8U3 227 aa6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 ERRFI1Q9UJM3 462 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-204ENST00000380176 IQCF6A8MYZ5 107 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 MLNRO43193 412 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 ADAM20O43506 726 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 JTBO76095 146 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 IGKV3-15P01624 115 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 TFF1P04155 84 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 GAPDHP04406 335 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 PGA5P0DJD9 388 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 COX5AP20674 150 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 SULT1A2P50226 295 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 HLA-DRB3P79483 266 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 TCF15Q12870 199 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF273Q14593 569 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 GUCA2BQ16661 112 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 WDR73Q6P4I2 378 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 UQCC3Q6UW78 93 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM185AQ8N0U4 392 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 OR10J5Q8NHC4 309 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 NRIP2Q9BQI9 281 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 RIMS4Q9H426 269 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 C11orf1Q9H5F2 150 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 MMP26Q9NRE1 261 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 OR2W1Q9Y3N9 320 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 POMT1Q9Y6A1 747 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 A0A0G2JRQ6 117 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM24AA6NFZ4 105 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM74A7A6NL05 159 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 HSBP1L1C9JCN9 74 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 PROB1E7EW31 1015 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 WNT9BO14905 357 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 AGPAT2O15120 278 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 GPR137BO60478 399 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 NXPH2O95156 264 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 IGLV2-14P01704 120 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 CTXN2P0C2S0 81 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 CBR1P16152 277 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 P2RY1P47900 373 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 PJVKQ0ZLH3 352 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 ACSF3Q4G176 576 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM74A3Q4VXF1 159 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 H1FOOQ8IZA3 346 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF610Q8N9Z0 462 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms