RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RASD2Q96D21 266 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 ZC2HC1AQ96GY0 325 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 GUCD1Q96NT3 240 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 TSSK2Q96PF2 358 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 SCGB3A2Q96PL1 93 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 OR2V2Q96R30 315 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 ATP5SQ99766 215 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 DUSP23Q9BVJ7 150 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 REPIN1Q9BWE0 567 aaKnown RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 RBM24Q9BX46 236 aaKnown RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 C6orf106Q9H6K1 298 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 TBL2Q9Y4P3 447 aaKnown RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 SZT2Q5T011 3432 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 GLOD5A6NK44 160 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 IGFBP3P17936 291 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 KITLGP21583 273 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 UCP1P25874 307 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 SRP14P37108 136 aaKnown RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 RPS27P42677 84 aaKnown RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 LCN2P80188 198 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 DCST2Q5T1A1 773 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 WDR74Q6RFH5 385 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 WDR82Q6UXN9 313 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 C2orf73Q8N5S3 287 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 TCTEX1D1Q8N7M0 179 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 OR4P4Q8NGL7 312 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 FAM46BQ96A09 425 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 SLC35A4Q96G79 324 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 LRFN3Q9BTN0 628 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 LRRC61Q9BV99 259 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 VN1R1Q9GZP7 353 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 SLC22A13Q9Y226 551 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 RHBDD3Q9Y3P4 386 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 TRAV1-1A0A0B4J248 108 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 TRAV8-6A0A0B4J262 113 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 ALG1L2C9J202 215 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 F2Z2F3 143 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 SOX1O00570 391 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 FUT7Q11130 342 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 KIAA1644Q3SXP7 199 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 OR10G6Q8NH81 332 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 DDIT4LQ96D03 193 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 P2RX4Q99571 388 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 AGMATQ9BSE5 352 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 FAM103A1Q9BTL3 118 aaKnown RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 SAMD10Q9BYL1 202 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 WNT10AQ9GZT5 417 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 ANAPC10Q9UM13 185 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 B3GALT5Q9Y2C3 310 aa6.45□□□□□ -1.38
CDKL5-201ENST00000379989 GOLGA4Q13439 2230 aaKnown RBP6.45□□□□□ -1.38
CDKL5-201ENST00000379989 PRUNE2Q8WUY3 3088 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 ALPK2Q86TB3 2170 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 ZNF732B4DXR9 585 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 TRAPPC2LH3BP13 241 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 SDCBPO00560 298 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 NPIPB7O75200 414 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 CDKN2AP42771 156 aaKnown RBP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 SLC6A8P48029 635 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 MGAT2Q10469 447 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 HLA-BQ31612 363 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 TCF23Q7RTU1 214 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 CDC20BQ86Y33 519 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 RARRES3Q9UL19 164 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 A0A0U1RQK1 487 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 C4orf51C9J302 202 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 TRAF3IP2O43734 574 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 LDB3O75112 727 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 NDUFB2O95178 105 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 WNT2P09544 360 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 NKX2-1P43699 371 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 LHX2P50458 406 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 MFGE8Q08431 387 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 IL13RA2Q14627 380 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 DEFB134Q4QY38 66 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 MPV17L2Q567V2 206 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 C1orf100Q5SVJ3 147 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 OR8I2Q8N0Y5 310 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 DEFB125Q8N687 156 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 OR52M1Q8NGK5 317 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 ASB5Q8WWX0 329 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 EMG1Q92979 244 aaKnown RBP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 ANAPC16Q96DE5 110 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 ARID1BQ8NFD5 2236 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 XIRP2A4UGR9 3374 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 A0A1W2PQD3 144 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 FAM24AA6NFZ4 105 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 CEBPZOSA8MTT3 80 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 DUX1O43812 170 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 H2BFMP0C1H6 154 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 PNMTP11086 282 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 S100GP29377 79 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 CLDN17P56750 224 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 BAXQ07812 192 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 SRSF7Q16629 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDKL5-201ENST00000379989 FAM78BQ5VT40 261 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 COLCA1Q6ZS62 124 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 RD3Q7Z3Z2 195 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 LYPD6Q86Y78 171 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 ATOH7Q8N100 152 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 OR5H2Q8NGV7 314 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms