RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 FAM46BQ96A09 425 aa19.66■□□□□ 0.74
TNFRSF4-201ENST00000379236 VCX3BQ9H321 246 aa19.66■□□□□ 0.74
TNFRSF4-201ENST00000379236 FAM90A9PA6NNJ1 464 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 CA11O75493 328 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 IGKV1D-33P01593 117 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 IGKV1-33P01594 117 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 UBBP0CG47 229 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 PF4V1P10720 104 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 FUT3P21217 361 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 DIAPH2-AS1Q14236 149 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 HNF4GQ14541 408 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 TMEM30BQ3MIR4 351 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 KHDC1LQ5JSQ8 128 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 TMEM104Q8NE00 496 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 UFD1Q92890 307 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 Q96M66 194 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 GNG12Q9UBI6 72 aa19.65■□□□□ 0.74
TNFRSF4-201ENST00000379236 TCRBV4S1A1TA0A5B7 111 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 UBE2QL1A1L167 161 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 G3V4G9 280 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 H0YHG0 523 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 MPIG6BO95866 241 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 REG1BP48304 166 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 ZNF816Q0VGE8 651 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 INSL4Q14641 139 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 KCNIP1Q9NZI2 227 aa19.64■□□□□ 0.73
TNFRSF4-201ENST00000379236 C12orf77C9JDV5 145 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 GLAP06280 429 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 HSD17B12Q53GQ0 312 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 NKAPLQ5M9Q1 402 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 CEACAM19Q7Z692 300 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 LINC00311Q8N616 119 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 C8orf31Q8N9H6 132 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 NRG4Q8WWG1 115 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 PHYHIPQ92561 330 aa19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 TSSC4Q9Y5U2 329 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF4-201ENST00000379236 IGHV1-3A0A0C4DH29 117 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 PDCD6O75340 191 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 AMY1AP04745 511 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 AMY2AP04746 511 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 HSMCR30P0CW71 290 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 VHLP40337 213 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 CD83Q01151 205 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 Q3ZCU0 254 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 FAM27D1Q5T7N8 215 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 UNQ9370/PRO34162Q6UXP9 181 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 LYPD6Q86Y78 171 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 NEDD4LQ96PU5 975 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 CCDC90BQ9GZT6 254 aa19.62■□□□□ 0.73
TNFRSF4-201ENST00000379236 FGF16O43320 207 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 RGS10O43665 173 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 HBZP02008 142 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 LOXL3P58215 753 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 SLC35A2P78381 396 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 LIPKQ5VXJ0 399 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 OR10V1Q8NGI7 309 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 TMEM59Q9BXS4 323 aa19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 LSM2Q9Y333 95 aaKnown RBP19.61■□□□□ 0.73
TNFRSF4-201ENST00000379236 IGHV3-72A0A0B4J1Y9 119 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 PSMB11A5LHX3 300 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 NCBP2LA6PVI3 153 aaKnown RBP19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 ADARB2-AS1A8MUL3 147 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 TXNL1O43396 289 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 PF4P02776 101 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 SRMP19623 302 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 MYF6P23409 242 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 C5orf56Q8N8D9 126 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 OR2T10Q8NGZ9 312 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 OR1L1Q8NH94 360 aa19.6■□□□□ 0.73
TNFRSF4-201ENST00000379236 SC5DO75845 299 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 RCC1P18754 421 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 CD33P20138 364 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 HTR2CP28335 458 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 SAMD5Q5TGI4 173 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 LRRTM1Q86UE6 522 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 TGIF2LXQ8IUE1 241 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 IZUMO1Q8IYV9 350 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 RTN4IP1Q8WWV3 396 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 SGCDQ92629 289 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 TMEM203Q969S6 136 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 ANKRD60Q9BZ19 345 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 TAF9BQ9HBM6 251 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 OR2S2Q9NQN1 319 aa19.59■□□□□ 0.73
TNFRSF4-201ENST00000379236 SERPINE3A8MV23 424 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 HSPA13P48723 471 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 IRF3Q14653 427 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 TRAM1Q15629 374 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 BEAN1Q3B7T3 259 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 C1orf100Q5SVJ3 147 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 FAM53AQ6NSI3 398 aaPredicted RBP19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 FOXRED2Q8IWF2 684 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 GAPTQ8N292 157 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 KCNG3Q8TAE7 436 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 CHPT1Q8WUD6 406 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 TGP01266 2768 aa19.58■□□□□ 0.72
TNFRSF4-201ENST00000379236 ERICH4A6NGS2 130 aa19.57■□□□□ 0.72
TNFRSF4-201ENST00000379236 SLC31A2O15432 143 aa19.57■□□□□ 0.72
TNFRSF4-201ENST00000379236 VSIG8P0DPA2 414 aa19.57■□□□□ 0.72
TNFRSF4-201ENST00000379236 GP2P55259 537 aaKnown RBP19.57■□□□□ 0.72
TNFRSF4-201ENST00000379236 RPS27AP62979 156 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms