RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ST3GAL6Q9Y274 331 aa13.8□□□□□ -0.2
PDLIM4-202ENST00000379018 C15orf65H3BRN8 121 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 ATP6V0E1O15342 81 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 IGF1P05019 195 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 RAB3AP20336 220 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 GZMHP20718 246 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 FASP25445 335 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 SOX2P48431 317 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 PRR18Q8N4B5 295 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 OR8H1Q8NGG4 311 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 MYOZ3Q8TDC0 251 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 ARPC1AQ92747 370 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 ST6GALNAC6Q969X2 333 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 ISOC1Q96CN7 298 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 CPNE2Q96FN4 548 aaPredicted RBP13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 PDCD1LG2Q9BQ51 273 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 TAS2R4Q9NYW5 299 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 GNG12Q9UBI6 72 aa13.79□□□□□ -0.2
PDLIM4-202ENST00000379018 GEMIN2O14893 280 aaKnown RBP13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 SERPINA2P20848 420 aa13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 KIAA0141Q14154 515 aaPredicted RBP13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 ECSCRQ19T08 205 aa13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 LHFPL3Q86UP9 236 aa13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 CASTOR1Q8WTX7 329 aa13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 ALG8Q9BVK2 526 aa13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 GABARAPL3Q9BY60 117 aa13.78□□□□□ -0.2
PDLIM4-202ENST00000379018 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.2
PDLIM4-202ENST00000379018 SAC3D1A6NKF1 404 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 AIPO00170 330 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 CSTBP04080 98 aaKnown RBP13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 CNTFRP26992 372 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 RBM11P57052 281 aaKnown RBP13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 PAX5Q02548 391 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 SLC25A48Q6ZT89 311 aaKnown RBP13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 PARP16Q8N5Y8 322 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 ACBD7Q8N6N7 88 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 OR52M1Q8NGK5 317 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 OR6Q1Q8NGQ2 317 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 OR5AK2Q8NH90 309 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 ISG20L2Q9H9L3 353 aaKnown RBP13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 AASSQ9UDR5 926 aa13.77□□□□□ -0.21
PDLIM4-202ENST00000379018 TRAV41A0A0B4J266 112 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 J3QRE1 110 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 TXNL1O43396 289 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 PPIFP30405 207 aaKnown RBP13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 RAB9AP51151 201 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 LSAMPQ13449 338 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 OR52N1Q8NH53 320 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 OR51J1Q9H342 316 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 GHITMQ9H3K2 345 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 OAZ3Q9UMX2 235 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 A3GALT2U3KPV4 340 aa13.76□□□□□ -0.21
PDLIM4-202ENST00000379018 DNAH1Q9P2D7 4330 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 IGHV4OR15-8A0A075B7B6 117 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 A0A087WW49 117 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 TMEM212A6NML5 194 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 E9PI62 339 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 LINC01619G3V211 115 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 RPSAP08865 295 aaKnown RBP13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 BLVRBP30043 206 aaPredicted RBP13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 ZNF134P52741 427 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 ACTBP60709 375 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 RUNX1Q01196 453 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 CT45A1Q5HYN5 189 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 STX19Q8N4C7 294 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 C8orf31Q8N9H6 132 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 CT45A3Q8NHU0 189 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 MRPL48Q96GC5 212 aaKnown RBP13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 S100A13Q99584 98 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 ZNF251Q9BRH9 671 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 TRAPPC2LQ9UL33 140 aa13.75□□□□□ -0.21
PDLIM4-202ENST00000379018 A0A1W2PN81 502 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 C12orf77C9JDV5 145 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 SPINT2O43291 252 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 ORC5O43913 435 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 IGLV1-40P01703 118 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 IGHV4-30-4P0DP06 118 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 CHRNA7P36544 502 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 PITPNAQ00169 270 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 ZNF439Q8NDP4 499 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 OR4K15Q8NH41 348 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 OR1L1Q8NH94 360 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 ABHD5Q8WTS1 349 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 LGALS12Q96DT0 336 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 RITA1Q96K30 269 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 OR4C12Q96R67 309 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 TM2D3Q9BRN9 247 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 RSRP1Q9BUV0 290 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 ANKRD60Q9BZ19 345 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
PDLIM4-202ENST00000379018 IGHV7-81A0A0B4J1V7 117 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 A0A1W2PP11 408 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 LDLRAD4O15165 306 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 IGHV3-11P01762 117 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 MT-ND4P03905 459 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 GALEQ14376 348 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms