RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 IGHV3OR15-7A0A075B7D8 119 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM218A2RU14 115 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 OR2C1O95371 312 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 H2AFB1P0C5Y9 115 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 GZMHP20718 246 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 UNC119Q13432 240 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 THNSL2Q86YJ6 484 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 PARD6AQ9NPB6 346 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 CACNG5Q9UF02 275 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 KCNMB2Q9Y691 235 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 PHOX2AO14813 284 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 CRHP06850 196 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 TESK1Q15569 626 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 C21orf62-AS1Q17RA5 79 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 LINC00518Q8N0U6 118 aa12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 GNPNAT1Q96EK6 184 aaPredicted RBP12.21□□□□□ -0.45
SHROOM1-203ENST00000378679 ZP1P60852 638 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 ADGRG7Q96K78 797 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 OR2V2Q96R30 315 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 ZFP92A6NM28 416 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 WISP1O95388 367 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 G0S2P27469 103 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 H2BFSP57053 126 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 HLA-DRB3P79483 266 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 ZNF660Q6AZW8 331 aaPredicted RBP12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 LIAT1Q6ZQX7 453 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 C9orf106Q8NAJ2 232 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 OR8G5Q8NG78 346 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 MRPL24Q96A35 216 aaKnown RBP12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 Q96M66 194 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.46
SHROOM1-203ENST00000378679 CYB5BO43169 146 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 POLR2GP62487 172 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 H3F3AP84243 136 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 FHL1Q13642 323 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 PRSS54Q6PEW0 395 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 TRAT1Q6PIZ9 186 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 NECAP1Q8NC96 275 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 CIB3Q96Q77 187 aaPredicted RBP12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 NOTCH2Q04721 2471 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 SPEGQ15772 3267 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 RNASEK-C17orf49H0YIS7 233 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 GPR37O15354 613 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 IL13RA2Q14627 380 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 PEAR1Q5VY43 1037 aaPredicted RBP12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 LCN15Q6UWW0 184 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 ZNF524Q96C55 264 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 OOEPA6NGQ2 149 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 DEFA4P12838 97 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 PRDX2P32119 198 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 FAM27E3Q08E93 113 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 LYZL2Q7Z4W2 148 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 ITLN1Q8WWA0 313 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 GAB2Q9UQC2 676 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 OR2W1Q9Y3N9 320 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 SZT2Q5T011 3432 aa12.2□□□□□ -0.46
SHROOM1-203ENST00000378679 HMSDA8MTL9 139 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 SCTP09683 121 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 VDAC1P21796 283 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 NRN1LQ496H8 165 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 OR10D4PQ8NGN7 298 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 BCL2L2Q92843 193 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 SFXN3Q9BWM7 321 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 RNF122Q9H9V4 155 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 RCC1P18754 421 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 ACSF3Q4G176 576 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 PLA2G2CQ5R387 149 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 RBMS3Q6XE24 437 aaKnown RBP12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 ZGRF1Q86YA3 2104 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 LRRK1Q38SD2 2015 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 PLXNB3Q9ULL4 1909 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 FAM24AA6NFZ4 105 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 GFRA1P56159 465 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 IGFBP7Q16270 282 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 RPUSD3Q6P087 351 aaKnown RBP12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 BTNL3Q6UXE8 466 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 OR4A4PQ8NGN8 299 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 NPDC1Q9NQX5 325 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 SPRR3Q9UBC9 169 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 WIPI2Q9Y4P8 454 aa12.19□□□□□ -0.46
SHROOM1-203ENST00000378679 OR2H2O95918 312 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 SFTPCP11686 197 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 NPBWR1P48145 328 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 ERVS71-1P61550 626 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 GNB1P62873 340 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 RPL7L1Q6DKI1 246 aaKnown RBP12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 LRP11Q86VZ4 500 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 CALHM1Q8IU99 346 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 GAL3ST2Q9H3Q3 398 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 CECR9P0C854 216 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 IGHV1-2P23083 117 aa12.18□□□□□ -0.46
SHROOM1-203ENST00000378679 C2orf68Q2NKX9 166 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms