RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ACTL10Q5JWF8 245 aa10.3□□□□□ -0.76
NPHP4-202ENST00000378161 MRGPREQ86SM8 312 aa10.3□□□□□ -0.76
NPHP4-202ENST00000378161 HOGA1Q86XE5 327 aa10.3□□□□□ -0.76
NPHP4-202ENST00000378161 GMPPAQ96IJ6 420 aaPredicted RBP10.3□□□□□ -0.76
NPHP4-202ENST00000378161 ZNF703Q9H7S9 590 aaPredicted RBP10.3□□□□□ -0.76
NPHP4-202ENST00000378161 MRPL16Q9NX20 251 aaKnown RBP10.3□□□□□ -0.76
NPHP4-202ENST00000378161 GAGE12HA6NDE8 117 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 ONECUT2O95948 504 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 CA3P07451 260 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 GFRA1P56159 465 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 ATP5IP56385 69 aaPredicted RBP10.29□□□□□ -0.76
NPHP4-202ENST00000378161 FMODQ06828 376 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 CDKN3Q16667 212 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 MRPL54Q6P161 138 aaKnown RBP10.29□□□□□ -0.76
NPHP4-202ENST00000378161 HARBI1Q96MB7 349 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 ZNF681Q96N22 645 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 TBC1D29Q9UFV1 150 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 CD300LBA8K4G0 201 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 F5H5K5 113 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 CXCL10P02778 98 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 FAHP16930 419 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 GNB2P62879 340 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 WDR82Q6UXN9 313 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 OR52M1Q8NGK5 317 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 CLDND2Q8NHS1 167 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 HOXB13Q92826 284 aaPredicted RBP10.29□□□□□ -0.76
NPHP4-202ENST00000378161 GPR132Q9UNW8 380 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 WDR81Q562E7 1941 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 RP1L1Q8IWN7 2480 aaPredicted RBP10.29□□□□□ -0.76
NPHP4-202ENST00000378161 SMIM17P0DL12 118 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 BLVRBP30043 206 aaPredicted RBP10.29□□□□□ -0.76
NPHP4-202ENST00000378161 MEF2BQ02080 365 aaPredicted RBP10.29□□□□□ -0.76
NPHP4-202ENST00000378161 WFDC12Q8WWY7 111 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 ST20Q9HBF5 79 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 MRPS17Q9Y2R5 130 aaKnown RBP10.29□□□□□ -0.76
NPHP4-202ENST00000378161 BRWD3Q6RI45 1802 aa10.29□□□□□ -0.76
NPHP4-202ENST00000378161 K7N7A8 449 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 SPINK4O60575 86 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 DAP3P51398 398 aaKnown RBP10.28□□□□□ -0.76
NPHP4-202ENST00000378161 RELBQ01201 579 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 Q6ZSR6 202 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 ZNF764Q96H86 408 aaPredicted RBP10.28□□□□□ -0.76
NPHP4-202ENST00000378161 CALHM2Q9HA72 323 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 CES1P1Q9UKY3 287 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 H7C1C5 153 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 HOXB9P17482 250 aaPredicted RBP10.28□□□□□ -0.76
NPHP4-202ENST00000378161 DYNLT3P51808 116 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 TDRG1Q3Y452 100 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 BLNKQ8WV28 456 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 YTHDF2Q9Y5A9 579 aaKnown RBP10.28□□□□□ -0.76
NPHP4-202ENST00000378161 CDC42EP2O14613 210 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 MT-ND6P03923 174 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 TCL1AP56279 114 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 DUSP2Q05923 314 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 PRTGQ2VWP7 1150 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 TEX29Q8N6K0 151 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 OR51G1Q8NGK1 321 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 MMP25Q9NPA2 562 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 UFC1Q9Y3C8 167 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 G3V3Y1 287 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 G3V4G9 280 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 NXPH3O95157 252 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 CTGFP29279 349 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 RUNX1Q01196 453 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 C19orf25Q9UFG5 118 aaPredicted RBP10.28□□□□□ -0.76
NPHP4-202ENST00000378161 NXT1Q9UKK6 140 aaKnown RBP10.28□□□□□ -0.76
NPHP4-202ENST00000378161 KCNE3Q9Y6H6 103 aa10.28□□□□□ -0.76
NPHP4-202ENST00000378161 SCN8AQ9UQD0 1980 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 PITX3O75364 302 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 RTP5Q14D33 572 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 RPEL1Q2QD12 228 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 PRR22Q8IZ63 422 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 LRRC61Q9BV99 259 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 PRRG4Q9BZD6 226 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 FAM206AQ9NX38 181 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 HS3ST3A1Q9Y663 406 aa10.27□□□□□ -0.76
NPHP4-202ENST00000378161 H3BMH7 237 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 CDKN1AP38936 164 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 SEC11AP67812 179 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 AGERQ15109 404 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 MORN2Q502X0 79 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF562Q6V9R5 426 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 OR10G4Q8NGN3 311 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 GPR146Q96CH1 333 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 OR10A2Q9H208 303 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 FGF22Q9HCT0 170 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 TUBD1Q9UJT1 453 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 B5MCH6 92 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 ENSAO43768 121 aaKnown RBP10.27□□□□□ -0.77
NPHP4-202ENST00000378161 CBLN1P23435 193 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 IL3RAP26951 378 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 UBE2G1P62253 170 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 YPEL5P62699 121 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 OR2A5Q96R48 311 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 ABHD14AQ9BUJ0 271 aa10.27□□□□□ -0.77
NPHP4-202ENST00000378161 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 HMGB3O15347 200 aaKnown RBP10.26□□□□□ -0.77
NPHP4-202ENST00000378161 GPR12P47775 334 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms