RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 RPL24P83731 157 aaKnown RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 UNQ9370/PRO34162Q6UXP9 181 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 OR4P4Q8NGL7 312 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 VSTM2LQ96N03 204 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 PITPNC1Q9UKF7 332 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 PAGE4O60829 102 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 ACTL6AO96019 429 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 MGPP08493 103 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 OR4A8P0C604 315 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 SURF2Q15527 256 aaPredicted RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 TMEM50BP56557 158 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 SKP2Q13309 424 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 WNT2BQ93097 391 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 LPAR5Q9H1C0 372 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 HILPDAQ9Y5L2 63 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 CENPVL1A0A0U1RR11 272 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 C16orf97H3BN30 126 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 IER3P46695 156 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 FAM74A7A6NL05 159 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 PLAUP00749 431 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 APCSP02743 223 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 PSG5Q15238 335 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 FAM74A3Q4VXF1 159 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 MRPL54Q6P161 138 aaKnown RBP10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 C1orf185Q5T7R7 199 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 SSMEM1Q8WWF3 244 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 STARD4Q96DR4 205 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 AURKAIP1Q9NWT8 199 aaPredicted RBP10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF716A6NP11 495 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 PEBP1P30086 187 aaKnown RBP10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 REG1BP48304 166 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 UBE2L3P68036 154 aaKnown RBP10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 PMS2CLQ68D20 193 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 MS4A3Q96HJ5 214 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 OOEPA6NGQ2 149 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 PITX3O75364 302 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 HAND1O96004 215 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 PSG2P11465 335 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 PDPNQ86YL7 162 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 D2HGDHQ8N465 521 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 ADAT3Q96EY9 351 aaPredicted RBP10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 GABRG3Q99928 467 aa10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF107Q9UII5 783 aaPredicted RBP10.49□□□□□ -0.73
PCDHA9-201ENST00000378122 OR4C45A6NMZ5 311 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 EMP1P54849 157 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 TMEM204Q9BSN7 226 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 PCED1AQ9H1Q7 454 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 SMCHD1A6NHR9 2005 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 A0A1W2PQD3 144 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 NANOS3P60323 173 aaKnown RBP10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 TNXAQ16473 311 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 Q71RC1 249 aaPredicted RBP10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 TMEM191AQ9H0A3 160 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 ZFC3H1O60293 1989 aaKnown RBP10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 PDE6DO43924 150 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 PPYP01298 95 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 VSIG8P0DPA2 414 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 LILRA6Q6PI73 481 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 OR13G1Q8NGZ3 307 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 OR5AC2Q9NZP5 309 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 RGPD3A6NKT7 1758 aaPredicted RBP10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 RGPD4Q7Z3J3 1758 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 KIR3DL2P43630 455 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 SULT1A2P50226 295 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 SLC23A3Q6PIS1 610 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 LINC01560Q8TB33 94 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 DTD1Q8TEA8 209 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 TBX15Q96SF7 602 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 IL36GQ9NZH8 169 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 ACAA2P42765 397 aaKnown RBP10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF273Q14593 569 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 FADS6Q8N9I5 356 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 MRGPRFQ96AM1 343 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 SLC7A10Q9NS82 523 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 WASHC3Q9Y3C0 194 aa10.48□□□□□ -0.73
PCDHA9-201ENST00000378122 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 OR5B21A6NL26 309 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 PRR33A8MZF0 331 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 MGAT2Q10469 447 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 TMEM255AQ5JRV8 349 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 DUSP15Q9H1R2 295 aaPredicted RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 TMEM167BQ9NRX6 74 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 SUCLG1P53597 346 aaKnown RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 PPP1R3EQ9H7J1 279 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 DTX4Q9Y2E6 619 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 ATAD5Q96QE3 1844 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 A0A1W2PPC1 479 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 FLYWCH2Q96CP2 140 aaKnown RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 MRPS18AQ9NVS2 196 aaKnown RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 COL4A1P02462 1669 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 MARF1Q9Y4F3 1742 aaKnown RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 SNURFLB1AK76 121 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 SNCGO76070 127 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms