RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 C12orf4Q9NQ89 552 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.69
CKAP2-202ENST00000378034 BATF3Q9NR55 127 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 MINOS1-NBL1R4GNA1 71 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 MFNGO00587 321 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 TOR1AO14656 332 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 VENTXO95231 258 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 RCC1P18754 421 aaPredicted RBP10.76□□□□□ -0.69
CKAP2-202ENST00000378034 NFYBP25208 207 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 RORCP51449 518 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 MRPS15P82914 257 aaKnown RBP10.76□□□□□ -0.69
CKAP2-202ENST00000378034 OR5H6Q8NGV6 325 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 OR9G1Q8NH87 305 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 ACOT12Q8WYK0 555 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 PHF21AQ96BD5 680 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 MALSU1Q96EH3 234 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 CMSS1Q9BQ75 279 aaKnown RBP10.76□□□□□ -0.69
CKAP2-202ENST00000378034 MEGF9Q9H1U4 602 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 DCSTAMPQ9H295 470 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 TAF9BQ9HBM6 251 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 POMT1Q9Y6A1 747 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 TRIM77I1YAP6 450 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 IGLV1-47P01700 117 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 HBZP02008 142 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 MELTFP08582 738 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 CD3GP09693 182 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 AANATQ16613 207 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 ZDHHC22Q8N966 263 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 SSMEM1Q8WWF3 244 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 AJUBAQ96IF1 538 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 CMTM3Q96MX0 182 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 ABCG5Q9H222 651 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 ZNF286AQ9HBT8 521 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 ZNRD1Q9P1U0 126 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 KCNK7Q9Y2U2 307 aa10.76□□□□□ -0.69
CKAP2-202ENST00000378034 MDFIC2A0A1B0GVS7 189 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 SDCBPO00560 298 aaPredicted RBP10.75□□□□□ -0.69
CKAP2-202ENST00000378034 NOL3O60936 208 aaKnown RBP10.75□□□□□ -0.69
CKAP2-202ENST00000378034 GSTP1P09211 210 aaKnown RBP10.75□□□□□ -0.69
CKAP2-202ENST00000378034 HTR1DP28221 377 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 HTD2P86397 168 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 HMGN3Q15651 99 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 BAIAP2L2Q6UXY1 529 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 C8orf31Q8N9H6 132 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 SLC25A38Q96DW6 304 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 CYYR1Q96J86 154 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 DPAGT1Q9H3H5 408 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 DIABLOQ9NR28 239 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 GFOD1Q9NXC2 390 aa10.75□□□□□ -0.69
CKAP2-202ENST00000378034 DNAJC9-AS1A6NH13 148 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 J3QR06 171 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 GNB3P16520 340 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 CEACAM3P40198 252 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 IER3P46695 156 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 LOXL3P58215 753 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 HLA-DRB5Q30154 266 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 CDNFQ49AH0 187 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 UBE2NLQ5JXB2 153 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 OR4P4Q8NGL7 312 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 AP3S1Q92572 193 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 GALMQ96C23 342 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 Q9N2K0 584 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 ESM1Q9NQ30 184 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 AMMECR1Q9Y4X0 333 aaPredicted RBP10.74□□□□□ -0.69
CKAP2-202ENST00000378034 LEUTXA8MZ59 168 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
CKAP2-202ENST00000378034 ZNF182P17025 639 aaPredicted RBP10.74□□□□□ -0.69
CKAP2-202ENST00000378034 UBA52P62987 128 aaKnown RBP10.74□□□□□ -0.69
CKAP2-202ENST00000378034 PITPNAQ00169 270 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 SLC9A3R2Q15599 337 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 SRSF7Q16629 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
CKAP2-202ENST00000378034 LTC4SQ16873 150 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 PNLIPRP3Q17RR3 467 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 LY6G6FQ5SQ64 297 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 OLFML2AQ68BL7 652 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 OR1L1Q8NH94 360 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 NDNFQ8TB73 568 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 SETD6Q8TBK2 473 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 S100A16Q96FQ6 103 aaKnown RBP10.74□□□□□ -0.69
CKAP2-202ENST00000378034 HDHD3Q9BSH5 251 aaPredicted RBP10.74□□□□□ -0.69
CKAP2-202ENST00000378034 MMP28Q9H239 520 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 DPM3Q9P2X0 92 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 JPT1Q9UK76 154 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 PSG11Q9UQ72 335 aa10.74□□□□□ -0.69
CKAP2-202ENST00000378034 CUBNO60494 3623 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 A0A075B6Q4 140 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 FAM172BPA6NC97 362 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 TALDO1P37837 337 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 ARFRP1Q13795 201 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 ZNF260Q3ZCT1 412 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 HACD4Q5VWC8 232 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 STEAP3Q658P3 488 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 MZT2AQ6P582 158 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 LHFPL4Q7Z7J7 247 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 PRR18Q8N4B5 295 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 LINC00311Q8N616 119 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 SAMD12Q8N8I0 201 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 OR5R1Q8NH85 324 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 FAM216AQ8WUB2 273 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 C17orf50Q8WW18 174 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms