RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 PIGCQ92535 297 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 NCKAP5O14513 1909 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 LRRC3CA6NJW4 275 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 ARSJQ5FYB0 599 aaPredicted RBP11.86□□□□□ -0.51
SF1-205ENST00000377394 RIPPLY2Q5TAB7 128 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 SP5Q6BEB4 398 aaPredicted RBP11.86□□□□□ -0.51
SF1-205ENST00000377394 ALKBH2Q6NS38 261 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 MRPL41Q8IXM3 137 aaKnown RBP11.86□□□□□ -0.51
SF1-205ENST00000377394 OR10D3Q8NH80 312 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 C11orf1Q9H5F2 150 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 GPR35Q9HC97 309 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 P4HTMQ9NXG6 502 aa11.86□□□□□ -0.51
SF1-205ENST00000377394 TRBV24-1A0A075B6N3 115 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 ZNF816-ZNF321PA0A0X1KG74 233 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 CST7O76096 145 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 PPYP01298 95 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 NPBWR2P48146 333 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 Q0VFX4 171 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 ZNF66Q6ZN08 573 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 TMEM217Q8N7C4 229 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 OR2V1Q8NHB1 315 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 TMEM37Q8WXS4 190 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 LAMP3Q9UQV4 416 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 CHD3Q12873 2000 aaKnown RBP11.85□□□□□ -0.51
SF1-205ENST00000377394 ZFP92A6NM28 416 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 CYB5R3P00387 301 aaPredicted RBP11.85□□□□□ -0.51
SF1-205ENST00000377394 P04436 131 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 FOLR3P41439 243 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 ERVS71-1P61550 626 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 MPV17LQ2QL34 196 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 ZNF705AQ6ZN79 300 aaPredicted RBP11.85□□□□□ -0.51
SF1-205ENST00000377394 CCDC71LQ8N9Z2 235 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 SPSB4Q96A44 273 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 ZNF442Q9H7R0 627 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 POLR3KQ9Y2Y1 108 aaPredicted RBP11.85□□□□□ -0.51
SF1-205ENST00000377394 VPS13AQ96RL7 3174 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 SCGB1D1O95968 90 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 SELEP16581 610 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 GZMHP20718 246 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 OR3A1P47881 315 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 PCBD1P61457 104 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 HERV-K104P61576 105 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 GNB2P62879 340 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 TLE1Q04724 770 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 CLN3Q13286 438 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 WIPI1Q5MNZ9 446 aaPredicted RBP11.85□□□□□ -0.51
SF1-205ENST00000377394 BATF2Q8N1L9 274 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 OR2C3Q8N628 320 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 ZNF611Q8N823 705 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
SF1-205ENST00000377394 C1QTNF5Q9BXJ0 243 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 GLRX2Q9NS18 164 aa11.85□□□□□ -0.51
SF1-205ENST00000377394 TNRC6BQ9UPQ9 1833 aaKnown RBP11.84□□□□□ -0.51
SF1-205ENST00000377394 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 MPPED1O15442 326 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 OR7C1O76099 320 aaPredicted RBP11.84□□□□□ -0.51
SF1-205ENST00000377394 RPLP1P05386 114 aaKnown RBP11.84□□□□□ -0.51
SF1-205ENST00000377394 IRF2P14316 349 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 RPP30P78346 268 aaKnown RBP11.84□□□□□ -0.51
SF1-205ENST00000377394 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
SF1-205ENST00000377394 SLC25A26Q70HW3 274 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 Q8NFD4 153 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 TECTBQ96PL2 329 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 FRYLO94915 3013 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 LOC102723971A0A1B0GUV8 181 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 B4DEV8 164 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 NXPH3O95157 252 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 CNOT4O95628 575 aaKnown RBP11.84□□□□□ -0.51
SF1-205ENST00000377394 CFIP05156 583 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 GNRHRP30968 328 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 WNT5AP41221 380 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 PPP1R32Q7Z5V6 425 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 OR5C1Q8NGR4 320 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 ABHD3Q8WU67 409 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 DEPPQ9NTK1 212 aa11.84□□□□□ -0.51
SF1-205ENST00000377394 NKX2-6A6NCS4 301 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 METTL15P1P0C7V9 234 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 BATFQ16520 125 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 CMTM1Q8IZ96 169 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 ZNF845Q96IR2 970 aaPredicted RBP11.83□□□□□ -0.52
SF1-205ENST00000377394 TMEM222Q9H0R3 208 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 SRD5A3Q9H8P0 318 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 TRDCB7Z8K6 153 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 CD33P20138 364 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 RPS18P62269 152 aaKnown RBP11.83□□□□□ -0.52
SF1-205ENST00000377394 HNF4GQ14541 408 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 GNMTQ14749 295 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 SLC23A3Q6PIS1 610 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 COLCA1Q6ZS62 124 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 SNIP1Q8TAD8 396 aaKnown RBP11.83□□□□□ -0.52
SF1-205ENST00000377394 HLA-CQ95604 372 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 PRDM14Q9GZV8 571 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 FGF23Q9GZV9 251 aaPredicted RBP11.83□□□□□ -0.52
SF1-205ENST00000377394 ZNF665Q9H7R5 613 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 SLC7A10Q9NS82 523 aa11.83□□□□□ -0.52
SF1-205ENST00000377394 A0A1B0GUS0 222 aa11.82□□□□□ -0.52
SF1-205ENST00000377394 TMEM210A6NLX4 147 aa11.82□□□□□ -0.52
SF1-205ENST00000377394 PROB1E7EW31 1015 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms