RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

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Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 FOXRED2Q8IWF2 684 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 JAGN1Q8N5M9 183 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 LINC00482Q8N8I6 264 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 MUL1Q969V5 352 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 SPACA1Q9HBV2 294 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 LINC00527Q9UJ94 153 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 ERGIC3Q9Y282 383 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 IGHV3-72A0A0B4J1Y9 119 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 NCBP2LA6PVI3 153 aaKnown RBP16.63■□□□□ 0.25
VSX1-201ENST00000376707 NUDT19A8MXV4 375 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 ANKRD65E5RJM6 399 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 AIPO00170 330 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 ORC5O43913 435 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 IGHG2P01859 326 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 MT-ND4P03905 459 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 IL3RAP26951 378 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 GLIPR1L1Q6UWM5 242 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 OR2W3Q7Z3T1 314 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 MRPL41Q8IXM3 137 aaKnown RBP16.63■□□□□ 0.25
VSX1-201ENST00000376707 LINC00311Q8N616 119 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 NKAIN3Q8N8D7 197 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 EAF1Q96JC9 268 aaPredicted RBP16.63■□□□□ 0.25
VSX1-201ENST00000376707 GPR61Q9BZJ8 451 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 GFOD1Q9NXC2 390 aa16.63■□□□□ 0.25
VSX1-201ENST00000376707 IGHV3-43A0A0B4J1X8 118 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 K7EIL1 84 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 MAS1P04201 325 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 CDK1P06493 297 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 IGHV3-43DP0DP04 118 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 MAPK3P27361 379 aaPredicted RBP16.62■□□□□ 0.25
VSX1-201ENST00000376707 EBI3Q14213 229 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 AWAT2Q6E213 333 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 ETV3LQ6ZN32 361 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 IZUMO1Q8IYV9 350 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 GAPTQ8N292 157 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 COMMD1Q8N668 190 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 C8orf31Q8N9H6 132 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 OR2T10Q8NGZ9 312 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 DPF1Q92782 380 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 ZFP57Q9NU63 452 aa16.62■□□□□ 0.25
VSX1-201ENST00000376707 FAM90A10PA6NDY2 464 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 FAM90A7PA6NKC0 464 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 FAM90A23PA8MXZ1 464 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 MCRIP1C9JLW8 97 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 SLC6A1P30531 599 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 HOXD3P31249 432 aaPredicted RBP16.61■□□□□ 0.25
VSX1-201ENST00000376707 THBS3P49746 956 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 KRTAP10-11P60412 298 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 TGIF2LXQ8IUE1 241 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 STPG2Q8N412 459 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 UQCC2Q9BRT2 126 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 MND1Q9BWT6 205 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 RAB9BQ9NP90 201 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 NKX1-2Q9UD57 310 aaPredicted RBP16.61■□□□□ 0.25
VSX1-201ENST00000376707 TRAPPC2LQ9UL33 140 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 DNAH3Q8TD57 4116 aa16.61■□□□□ 0.25
VSX1-201ENST00000376707 SPINT2O43291 252 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 Q3ZCU0 254 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 DEFB121Q5J5C9 76 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 C6orf141Q5SZD1 244 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 FAM53AQ6NSI3 398 aaPredicted RBP16.6■□□□□ 0.25
VSX1-201ENST00000376707 UNQ9370/PRO34162Q6UXP9 181 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 C8orf86Q6ZUL3 223 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 MS4A15Q8N5U1 240 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 KLHL30-AS1Q8NEE0 82 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 RTN4IP1Q8WWV3 396 aaPredicted RBP16.6■□□□□ 0.25
VSX1-201ENST00000376707 LIN7CQ9NUP9 197 aaKnown RBP16.6■□□□□ 0.25
VSX1-201ENST00000376707 ETAA1Q9NY74 926 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 GNG12Q9UBI6 72 aa16.6■□□□□ 0.25
VSX1-201ENST00000376707 C12orf77C9JDV5 145 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 AP4M1O00189 453 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 SC5DO75845 299 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 GLAP06280 429 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 MGMTP16455 207 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 C6orf183Q5T699 404 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 SYT6Q5T7P8 510 aaPredicted RBP16.59■□□□□ 0.25
VSX1-201ENST00000376707 RAB12Q6IQ22 244 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 C18orf65Q6ZTR6 163 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 Q8N6K4 173 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 TMEM104Q8NE00 496 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 ST6GALNAC6Q969X2 333 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 Q96M66 194 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 MCRIP2Q9BUT9 160 aaKnown RBP16.59■□□□□ 0.25
VSX1-201ENST00000376707 SELENOIQ9C0D9 397 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 ABCG5Q9H222 651 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 GHRLQ9UBU3 117 aa16.59■□□□□ 0.25
VSX1-201ENST00000376707 LSM2Q9Y333 95 aaKnown RBP16.59■□□□□ 0.25
VSX1-201ENST00000376707 WI2-2373I1.2A0A1W2PRP0 233 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 LINC01548A6NM66 108 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 CA11O75493 328 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 MOSP00540 346 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 CD1BP29016 333 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 MYCNOSP40205 109 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 GPR12P47775 334 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 EGFEM1PQ0D2K5 195 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 TMEM30BQ3MIR4 351 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 ACSM3Q53FZ2 586 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 TEX38Q6PEX7 206 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 ZNF695Q8IW36 515 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 PRR18Q8N4B5 295 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms