RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 HARBI1Q96MB7 349 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 TREM2Q9NZC2 230 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 INSIG2Q9Y5U4 225 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 NUDT3O95989 172 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 PMELP40967 661 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 TMEM33P57088 247 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 ZFP64Q9NPA5 681 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 TRBV5-4A0A0C4DH59 114 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 FAM181BA6NEQ2 426 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 EMP1P54849 157 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 GUSBP11Q6P575 273 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 TSPAN32Q96QS1 320 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF71Q9NQZ8 489 aaPredicted RBP11.01□□□□□ -0.65
VPS13A-204ENST00000376634 SPINK14Q6IE38 97 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 C10orf35Q96D05 121 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 CRYBB2P43320 205 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 MRPS11P82912 194 aaKnown RBP11.01□□□□□ -0.65
VPS13A-204ENST00000376634 PRNTQ86SH4 94 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 CHRNA10Q9GZZ6 450 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 FUT9Q9Y231 359 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 COL5A3P25940 1745 aaPredicted RBP11.01□□□□□ -0.65
VPS13A-204ENST00000376634 RAB32Q13637 225 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF383Q8NA42 475 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 RAG2P55895 527 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 TICRRQ7Z2Z1 1910 aa11.01□□□□□ -0.65
VPS13A-204ENST00000376634 FAM74A7A6NL05 159 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF253O75346 499 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 KLRB1Q12918 225 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 OR4X1Q8NH49 305 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 TMEM204Q9BSN7 226 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 RAXQ9Y2V3 346 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 CUL9Q8IWT3 2517 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 IER3P46695 156 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 SSX8Q7RTT4 187 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 OR6X1Q8NH79 312 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 BTF3P20290 206 aaKnown RBP11□□□□□ -0.65
VPS13A-204ENST00000376634 CALHM1Q8IU99 346 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 MTURNQ8N3F0 131 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 HIGD1AQ9Y241 93 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 MPC1Q9Y5U8 109 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 ROM1Q03395 351 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 PTX4Q96A99 478 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 IFITM10A6NMD0 228 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 P2RY1P47900 373 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 RAC3P60763 192 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 MRPL54Q6P161 138 aaKnown RBP11□□□□□ -0.65
VPS13A-204ENST00000376634 BSXQ3C1V8 233 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 CXCL16Q9H2A7 254 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 GABRG2P18507 467 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 CTF1Q16619 201 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 PRSS54Q6PEW0 395 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 VAX2Q9UIW0 290 aa11□□□□□ -0.65
VPS13A-204ENST00000376634 SYNGR2O43760 224 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 FAM157CP0CG43 387 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 COL25A1Q9BXS0 654 aaPredicted RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 PRR14LQ5THK1 2151 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 DNAL4O96015 105 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 MPLP40238 635 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 TRIP6Q15654 476 aaKnown RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 SLC25A42Q86VD7 318 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 FGF9P31371 208 aaPredicted RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 NOVP48745 357 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 SOX8P57073 446 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 PLAURQ03405 335 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 OR8B12Q8NGG6 310 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 MIOXQ9UGB7 285 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF324O75467 553 aaPredicted RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 EBLN2Q6P2I7 272 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 C12orf54Q6X4T0 127 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 OR10J6PQ8NGY7 276 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 SGK494Q96LW2 274 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 RNF122Q9H9V4 155 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 PRSS8Q16651 343 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 MPV17LQ2QL34 196 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 DEGS2Q6QHC5 323 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 GPA33Q99795 319 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 TRBV23-1A0A0A0MS06 115 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 SRD5A2P31213 254 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 RAB9AP51151 201 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 FAM53AQ6NSI3 398 aaPredicted RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 C10orf126Q8N4M7 172 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 OR1L8Q8NGR8 309 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 OR51B2Q9Y5P1 312 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 GAGE10A6NGK3 116 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 STAG3L3P0CL85 134 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 COL19A1Q14993 1142 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 C12orf73Q69YU5 71 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 ERASQ7Z444 233 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 MOGAT3Q86VF5 341 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 NFAM1Q8NET5 270 aaPredicted RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
VPS13A-204ENST00000376634 NUDT16L1Q9BRJ7 211 aaKnown RBP10.99□□□□□ -0.65
VPS13A-204ENST00000376634 PCMT1P22061 227 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 HERPUD1Q15011 391 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 MEGF10Q96KG7 1140 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 MT-CO3P00414 261 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 RPS4XP62701 263 aaKnown RBP10.98□□□□□ -0.65
VPS13A-204ENST00000376634 SPEM2Q0P670 501 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 APOBEC4Q8WW27 367 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms