RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 RUNX1Q01196 453 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 KHDC3LQ587J8 217 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 OR2Y1Q8NGV0 311 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 ANAPC16Q96DE5 110 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 WDFY2Q96P53 400 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 NINQ8N4C6 2090 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 J3QR06 171 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 GAB4Q2WGN9 574 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 ZNF441Q8N8Z8 693 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 ZNF552Q9H707 407 aaPredicted RBP11.98□□□□□ -0.49
COL4A1-201ENST00000375820 NEU3Q9UQ49 428 aa11.98□□□□□ -0.49
COL4A1-201ENST00000375820 WDR74Q6RFH5 385 aaPredicted RBP11.97□□□□□ -0.49
COL4A1-201ENST00000375820 RFLNBQ8N5W9 214 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 IL36RNQ9UBH0 155 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 KNL1Q8NG31 2342 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 M0R143 59 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 SYNGR1O43759 233 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 RNF122Q9H9V4 155 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 LAMB1P07942 1786 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 CENPVL1A0A0U1RR11 272 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 ADIPOQQ15848 244 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 ALG14Q96F25 216 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 ADTRPQ96IZ2 230 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 NRAPQ86VF7 1730 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 ZIC1Q15915 447 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 SIGIRRQ6IA17 410 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 DEGS2Q6QHC5 323 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 BPIFA4PQ86YQ2 179 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 DHRS7CA6NNS2 312 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 CRHP06850 196 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 SCGB1A1P11684 91 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 PRF1P14222 555 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 ZNF250P15622 560 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 LGALSLQ3ZCW2 172 aaPredicted RBP11.97□□□□□ -0.49
COL4A1-201ENST00000375820 MIEN1Q9BRT3 115 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 KLHDC2Q9Y2U9 406 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 V9GYH0 126 aa11.97□□□□□ -0.49
COL4A1-201ENST00000375820 H3BTX0 84 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 LY6EQ16553 131 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 CA10Q9NS85 328 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 TCF21O43680 179 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 PAFAH1B2P68402 229 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 HMGCLL1Q8TB92 370 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 ASB5Q8WWX0 329 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 MARVELD1Q9BSK0 173 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 CES1P1Q9UKY3 287 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 C7orf77A4D0Y5 90 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 NUBP1P53384 320 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 PRSS8Q16651 343 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 BVESQ8NE79 360 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 SGK494Q96LW2 274 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 KLK13Q9UKR3 277 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 PLCH1Q4KWH8 1693 aa11.96□□□□□ -0.49
COL4A1-201ENST00000375820 PF4V1P10720 104 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 KIR2DL1P43626 348 aaPredicted RBP11.96□□□□□ -0.5
COL4A1-201ENST00000375820 KIR2DL2P43627 348 aaPredicted RBP11.96□□□□□ -0.5
COL4A1-201ENST00000375820 TEPPQ6URK8 271 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 TMEM52Q8NDY8 209 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 C16orf92Q96LL3 132 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 OR2W1Q9Y3N9 320 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 KLF7O75840 302 aaPredicted RBP11.96□□□□□ -0.5
COL4A1-201ENST00000375820 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.5
COL4A1-201ENST00000375820 RPL31P62899 125 aaKnown RBP11.96□□□□□ -0.5
COL4A1-201ENST00000375820 RRN3P1Q2M238 152 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 BHLHA9Q7RTU4 235 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 C9orf40Q8IXQ3 194 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 C10orf111Q8N326 155 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 LEAP2Q969E1 77 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 COX14Q96I36 57 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 HEXA-AS1Q9H8Q6 139 aa11.96□□□□□ -0.5
COL4A1-201ENST00000375820 KIAA0100Q14667 2235 aaKnown RBP11.96□□□□□ -0.5
COL4A1-201ENST00000375820 REG1AP05451 166 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 HIST1H1EP10412 219 aaKnown RBP11.95□□□□□ -0.5
COL4A1-201ENST00000375820 SLC25A53Q5H9E4 307 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 RAB37Q96AX2 223 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 PAXXQ9BUH6 204 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 MIXL1Q9H2W2 232 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 TMEM38BQ9NVV0 291 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 HSPB8Q9UJY1 196 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 ZNF519Q8TB69 540 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 TTTY12Q9BZ98 90 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 C1RLQ9NZP8 487 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 TMEM218A2RU14 115 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 FAM181BA6NEQ2 426 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 CXorf1O96002 111 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 LILRA6Q6PI73 481 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 PGLYRP3Q96LB9 341 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 TP53RKQ96S44 253 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 LOC107984156A0A0G2JMH3 177 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 HOXC8P31273 242 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 SSTR5P35346 364 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 ZNF826PQ6ZT77 177 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 ARL17AQ8IVW1 177 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 PCM1Q15154 2024 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 IGKV3-20P01619 116 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 C19orf54Q5BKX5 351 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms