RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 OR51B6Q9H340 312 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 DLL3Q9NYJ7 618 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 MPC1Q9Y5U8 109 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 PCSK5Q92824 1860 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 DMDP11532 3685 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 IFNA5P01569 189 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 HBE1P02100 147 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 HSPB1P04792 205 aaKnown RBP12.39□□□□□ -0.43
MSH5-201ENST00000375703 OR8U8P0C7N1 319 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 HLA-DRB3P79483 266 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 ZNF506Q5JVG8 444 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 H1FOOQ8IZA3 346 aaPredicted RBP12.39□□□□□ -0.43
MSH5-201ENST00000375703 TMEM105Q8N8V8 129 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 MUCL1Q96DR8 90 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 NIT2Q9NQR4 276 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 PLA2G3Q9NZ20 509 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 WSB1Q9Y6I7 421 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 PIGBOS1A0A0B4J2F0 54 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 H0YL77 283 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 DEGS1O15121 323 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 JMJD7P0C870 316 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 APLNRP35414 380 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 RPS10P46783 165 aaKnown RBP12.39□□□□□ -0.43
MSH5-201ENST00000375703 OR1C1Q15619 314 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 IZUMO4Q1ZYL8 232 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 ZNF880Q6PDB4 577 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 NUFIP2Q7Z417 695 aaKnown RBP12.39□□□□□ -0.43
MSH5-201ENST00000375703 C1QL4Q86Z23 238 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 CYB561D1Q8N8Q1 229 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 STRADBQ9C0K7 418 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 PRO3102Q9H379 93 aa12.39□□□□□ -0.43
MSH5-201ENST00000375703 FREM1Q5H8C1 2179 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 OR5B21A6NL26 309 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 LINC00587B1AMM8 73 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 TXNL1O43396 289 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 SLC25A6P12236 298 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 DLK1P80370 383 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 RNPS1Q15287 305 aaKnown RBP12.38□□□□□ -0.43
MSH5-201ENST00000375703 LPAL2Q16609 132 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 P4HA3Q7Z4N8 544 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 MCEMP1Q8IX19 187 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 OR10V1Q8NGI7 309 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 CLDND2Q8NHS1 167 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 TCEAL3Q969E4 200 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 ZNF251Q9BRH9 671 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 KIAA1324LA8MWY0 1029 aaPredicted RBP12.38□□□□□ -0.43
MSH5-201ENST00000375703 NDUFS6O75380 124 aaKnown RBP12.38□□□□□ -0.43
MSH5-201ENST00000375703 RHBDL1O75783 438 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 CNOT4O95628 575 aaKnown RBP12.38□□□□□ -0.43
MSH5-201ENST00000375703 CA6P23280 308 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 WNT5AP41221 380 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 PLGLB1Q02325 96 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 TMEM267Q0VDI3 215 aaPredicted RBP12.38□□□□□ -0.43
MSH5-201ENST00000375703 OR2T2Q6IF00 324 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 Q6ZRM9 215 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 TMEM251Q8N6I4 163 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 ABI3Q9P2A4 366 aa12.38□□□□□ -0.43
MSH5-201ENST00000375703 ARGFXA6NJG6 315 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 EIF2S3P41091 472 aaKnown RBP12.37□□□□□ -0.43
MSH5-201ENST00000375703 LINC00696Q6ZRV3 163 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 NIPSNAP3BQ9BS92 247 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 HIPK2Q9H2X6 1198 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 OR1A1Q9P1Q5 309 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 MMP24Q9Y5R2 645 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 A0A087WWC5 75 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 TRAV39A0A0B4J263 110 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 FABP1P07148 127 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 IGFBP7Q16270 282 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 C3AR1Q16581 482 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 ZNF295-AS1Q8N0V1 137 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 PRR18Q8N4B5 295 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 SCGB1C1Q8TD33 95 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 CABLES2Q9BTV7 478 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 SPRY4Q9C004 299 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 OR51I2Q9H344 312 aa12.37□□□□□ -0.43
MSH5-201ENST00000375703 CLN3Q13286 438 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 PKIBQ9C010 78 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 GSN-AS1Q9NRJ2 163 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 PRSS50Q9UI38 385 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 PPP1R3CQ9UQK1 317 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 RBM7Q9Y580 266 aaKnown RBP12.36□□□□□ -0.43
MSH5-201ENST00000375703 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 TNRC6AQ8NDV7 1962 aaKnown RBP12.36□□□□□ -0.43
MSH5-201ENST00000375703 C9orf172C9J069 976 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 CLN5O75503 358 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 IGKV1-39P01597 117 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 IGKV1D-39P04432 117 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 CDX2Q99626 313 aaPredicted RBP12.36□□□□□ -0.43
MSH5-201ENST00000375703 C12orf49Q9H741 205 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 CACNG5Q9UF02 275 aa12.36□□□□□ -0.43
MSH5-201ENST00000375703 LRP5LA4QPB2 252 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 SYNGR2O43760 224 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 KIAA0141Q14154 515 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms