RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 OR3A4PP47883 348 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 ACKR1Q16570 336 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 BSXQ3C1V8 233 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 MRPL14Q6P1L8 145 aaKnown RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 NUP54Q7Z3B4 507 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 NFAM1Q8NET5 270 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 OR10S1Q8NGN2 331 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 OR2T10Q8NGZ9 312 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 TOMM40LQ969M1 308 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 C18orf12Q96KH6 178 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 SMIM7Q9BQ49 75 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 TMEM106BQ9NUM4 274 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 C19orf25Q9UFG5 118 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 APC2O95996 2303 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 A0A1W2PP11 408 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 CBY3A6NI87 242 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 IFNA1P01562 189 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 BLVRBP30043 206 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-203ENST00000375315 RUNX1Q01196 453 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 CST9LP1Q5W188 147 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 CLEC2AQ6UVW9 174 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 C6orf15Q6UXA7 325 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-203ENST00000375315 GCNT2Q8N0V5 402 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 TMEM171Q8WVE6 324 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 OR51I2Q9H344 312 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 PLK3Q9H4B4 646 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 COA3Q9Y2R0 106 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-203ENST00000375315 FREM3P0C091 2139 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 ZFHX4Q86UP3 3567 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 TTRP02766 147 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 PPBPP02775 128 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF728P0DKX0 622 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 TCF15Q12870 199 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 UBE2V1Q13404 147 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.48□□□□□ -0.73
C9orf3-203ENST00000375315 CLEC12BQ2HXU8 276 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 MAJINQ3KP22 176 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 TMEM164Q5U3C3 297 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 CYP2G1PQ6ZSU1 146 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 TMEM252Q8N6L7 170 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 OR4D5Q8NGN0 318 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 C1orf147Q96MC9 270 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-203ENST00000375315 DECR2Q9NUI1 292 aa10.48□□□□□ -0.73
C9orf3-203ENST00000375315 TRAV39A0A0B4J263 110 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 CEBPZOSA8MTT3 80 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 MPZL1O95297 269 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 TYMSP04818 313 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 OR5G3P0C626 314 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 UBE2NP61088 152 aaKnown RBP10.47□□□□□ -0.73
C9orf3-203ENST00000375315 OR8G2PQ6IF36 304 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 LINC00346Q8IVM7 164 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 OR1L6Q8NGR2 347 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF665Q9H7R5 613 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 ELL3Q9HB65 397 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-203ENST00000375315 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 EML6Q6ZMW3 1958 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 AKAP13Q12802 2813 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 IGLV3-12A0A075B6K2 115 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 VSTM2BA6NLU5 285 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 CBR3O75828 277 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 NKX2-1P43699 371 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-203ENST00000375315 DYNLT3P51808 116 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 TAS2R30P59541 319 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF468Q5VIY5 522 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-203ENST00000375315 KCNIP4Q6PIL6 250 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 NUDT10Q8NFP7 164 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF519Q8TB69 540 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 LOXL4Q96JB6 756 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 RASL10BQ96S79 203 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-203ENST00000375315 PECRQ9BY49 303 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 DNAJC13O75165 2243 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 GP1BBP13224 206 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 IL11P20809 199 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 CARD18P57730 90 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 DCAF7P61962 342 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 SRSF6Q13247 344 aaKnown RBP10.47□□□□□ -0.73
C9orf3-203ENST00000375315 PRSS33Q8NF86 280 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 OR2D3Q8NGH3 330 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 OR2Y1Q8NGV0 311 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 CORO2AQ92828 525 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 CYYR1Q96J86 154 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 VPS25Q9BRG1 176 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 AGMATQ9BSE5 352 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 PBOV1Q9GZY1 135 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 LYRM2Q9NU23 88 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-203ENST00000375315 RNF150Q9ULK6 438 aa10.47□□□□□ -0.73
C9orf3-203ENST00000375315 HSBP1L1C9JCN9 74 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 UCP3P55916 312 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 TPPP2P59282 170 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 BAXQ07812 192 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 PCOLCEQ15113 449 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 TMEM41BQ5BJD5 291 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 SLC25A24Q6NUK1 477 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 VASH2Q86V25 355 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 FAM89BQ8N5H3 189 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 CMTM2Q8TAZ6 248 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 ANAPC16Q96DE5 110 aa10.46□□□□□ -0.73
C9orf3-203ENST00000375315 TXNIPQ9H3M7 391 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms