RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SGPP2Q8IWX5 399 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 ZNF664Q8N3J9 261 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 KCNRGQ8N5I3 272 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 C11orf42Q8N5U0 333 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 TMEM230Q96A57 120 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 SARAFQ96BY9 339 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 SEC22AQ96IW7 307 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 DECR2Q9NUI1 292 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 TNFSF18Q9UNG2 199 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 MEMO1Q9Y316 297 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 RBM7Q9Y580 266 aaKnown RBP7.05□□□□□ -1.28
UBR4-202ENST00000375224 FRYLO94915 3013 aa7.05□□□□□ -1.28
UBR4-202ENST00000375224 TNRC6AQ8NDV7 1962 aaKnown RBP7.05□□□□□ -1.28
UBR4-202ENST00000375224 CD300LBA8K4G0 201 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 EEF1E1-BLOC1S5C9J1V9 151 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 TRAPPC2LH3BP13 241 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 BCL2L11O43521 198 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 ARG1P05089 322 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 PSMB6P28072 239 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 UBE2NP61088 152 aaKnown RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 SRSF3P84103 164 aaKnown RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 SLC9A3R2Q15599 337 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 SRSF7Q16629 238 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBR4-202ENST00000375224 PIGYQ3MUY2 71 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 DHRS11Q6UWP2 260 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 LINC00596Q86U02 117 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 SLC30A7Q8NEW0 376 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 C20orf24Q9BUV8 137 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 ZNF442Q9H7R0 627 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 C1orf123Q9NWV4 160 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 CLCF1Q9UBD9 225 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 CACNA1GO43497 2377 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 C13orf42A0A1B0GVH6 325 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 AGPAT2O15120 278 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 CCL2P13500 99 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 DAOP14920 347 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 CEACAM8P31997 349 aaPredicted RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 RBMXP38159 391 aaKnown RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 FGF12P61328 243 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 MPV17LQ2QL34 196 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 HIKESHIQ53FT3 197 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 AWAT1Q58HT5 328 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 WDR73Q6P4I2 378 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 ZNF573Q86YE8 665 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 CALHM1Q8IU99 346 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 MALSU1Q96EH3 234 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 ZNF430Q9H8G1 570 aaPredicted RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 ZNF318Q5VUA4 2279 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 OTOGLQ3ZCN5 2332 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 ZNF503-AS2A6NEH8 195 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 ZNF732B4DXR9 585 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 OR7C1O76099 320 aaPredicted RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 PET100P0DJ07 73 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 CEACAM1P13688 526 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 EPHA1P21709 976 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 GLRA1P23415 457 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 CD80P33681 288 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 RPL19P84098 196 aaKnown RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 HAGHQ16775 308 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 OR2T2Q6IF00 324 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 FAM214BQ7L5A3 538 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 MDP1Q86V88 176 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 C1QL4Q86Z23 238 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 AKR1E2Q96JD6 320 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 MICU1Q9BPX6 476 aa7.04□□□□□ -1.28
UBR4-202ENST00000375224 HDHD3Q9BSH5 251 aaPredicted RBP7.04□□□□□ -1.28
UBR4-202ENST00000375224 GOSR1O95249 250 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 OR2C1O95371 312 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 GPM6AP51674 278 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 GNG3P63215 75 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 PMP22Q01453 160 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 LRRC37A5PQ49AS3 106 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 UNQ6126/PRO20091Q6UXV3 157 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 Q6ZS49 121 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 OR8U1Q8NH10 309 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 CD300LFQ8TDQ1 290 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 PIK3IP1Q96FE7 263 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 RNF2Q99496 336 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 CDH20Q9HBT6 801 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 IGKV1D-8A0A087WSZ0 117 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 NGFP01138 241 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 MBPP02686 304 aaPredicted RBP7.03□□□□□ -1.28
UBR4-202ENST00000375224 STAG3L3P0CL85 134 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 ZNF728P0DKX0 622 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 UCP3P55916 312 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 KLF3P57682 345 aaPredicted RBP7.03□□□□□ -1.28
UBR4-202ENST00000375224 SUPT4H1P63272 117 aaKnown RBP7.03□□□□□ -1.28
UBR4-202ENST00000375224 ABCA11PQ4W5N1 156 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 INO80CQ6PI98 192 aaPredicted RBP7.03□□□□□ -1.28
UBR4-202ENST00000375224 ZADH2Q8N4Q0 377 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 OR1J1Q8NGS3 322 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 HPSE2Q8WWQ2 592 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 OR5P3Q8WZ94 311 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 C2orf50Q96LR7 162 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 TRIB1Q96RU8 372 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 SYT3Q9BQG1 590 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 PKIBQ9C010 78 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 TRDCB7Z8K6 153 aa7.03□□□□□ -1.28
UBR4-202ENST00000375224 CEACAM4O75871 244 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms