RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 LSM7Q9UK45 103 aaKnown RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 RCL1Q9Y2P8 373 aaKnown RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 FAM96BQ9Y3D0 163 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 J3QR89 54 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 RHODO00212 210 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 GAPDHSO14556 408 aaPredicted RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 GZMMP51124 257 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 TIAL1Q01085 375 aaKnown RBP eCLIP6.77□□□□□ -1.33
USP48-203ENST00000374732 ZNF678Q5SXM1 525 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 Q6ZN92 141 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 MEX3DQ86XN8 651 aaKnown RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 OR52E2Q8NGJ4 325 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 OR4A5Q8NH83 315 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 TMEM171Q8WVE6 324 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 ZNRF4Q8WWF5 429 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 TMEM18Q96B42 140 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 HSD17B10Q99714 261 aaKnown RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 FGF20Q9NP95 211 aaPredicted RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 VAX2Q9UIW0 290 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 PRNDQ9UKY0 176 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 GBF1Q92538 1859 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 KIAA1671Q9BY89 1806 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 TRAV24A0A0B4J272 114 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 IGHV1-69-2A0A0G2JMI3 117 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 CXorf51AA0A1B0GTR3 108 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 OTOL1A6NHN0 477 aaPredicted RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 TNFSF12O43508 249 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 IGHG4P01861 327 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 CATP04040 527 aaKnown RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 IER3P46695 156 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 SSX1Q16384 188 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 TP53I3Q53FA7 332 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 OR2T5Q6IEZ7 315 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 TMEM207Q6UWW9 146 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 TEX45Q8NA69 505 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 OR5D16Q8NGK9 328 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 OR6K6Q8NGW6 343 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 OR2T29Q8NH02 315 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 ABHD5Q8WTS1 349 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 NPIPB3Q92617 1050 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 SDSLQ96GA7 329 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 TSPAN32Q96QS1 320 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 CACFD1Q9UGQ2 172 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 ZNF443Q9Y2A4 671 aaPredicted RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 A0A1W2PPK0 400 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 DHRS12A0PJE2 317 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 FAM166BA8MTA8 275 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 C17orf100A8MU93 164 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 MPPED1O15442 326 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 ZNF37AP17032 561 aaPredicted RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 HMGA1P17096 107 aaKnown RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 THBS3P49746 956 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 PSG9Q00887 426 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 AADACL3Q5VUY0 350 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 STUMQ69YW2 141 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 TMEM200BQ69YZ2 307 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 SLC39A11Q8N1S5 342 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 WDR31Q8NA23 367 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 THEM6Q8WUY1 208 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 RSPRY1Q96DX4 576 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 MYEOVQ96EZ4 313 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 LOXL2Q9Y4K0 774 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 TEX48A0A1B0GUV7 120 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 A0A1W2PRD5 423 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 AGFG2O95081 481 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 MOSP00540 346 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 CSRP1P21291 193 aaKnown RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 OR1D4P47884 311 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 ROM1Q03395 351 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 GUSBP1Q15486 140 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 RGNQ15493 299 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 LRRC10Q5BKY1 277 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 MARCH9Q86YJ5 346 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 IZUMO1Q8IYV9 350 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 CA13Q8N1Q1 262 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 IL22RA1Q8N6P7 574 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 KIR3DL3Q8N743 410 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 CABLES2Q9BTV7 478 aa6.76□□□□□ -1.33
USP48-203ENST00000374732 KLF16Q9BXK1 252 aaPredicted RBP6.76□□□□□ -1.33
USP48-203ENST00000374732 A0A0D9SEW6 157 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 BBIP1A8MTZ0 92 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 E9PLN8 166 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 STC2O76061 302 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 PFN1P07737 140 aaKnown RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 ATF1P18846 271 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 P2RY1P47900 373 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 PGGT1BP53609 377 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 RPL15P61313 204 aaKnown RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 RPL31P62899 125 aaKnown RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 HSPB3Q12988 150 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 C8orf82Q6P1X6 216 aaPredicted RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 C8orf86Q6ZUL3 223 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 CBLL1Q75N03 491 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 ZDHHC22Q8N966 263 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 STAG3L4Q8TBR4 150 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 CCDC140Q96MF4 163 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms