RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 COX5BP10606 129 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 CEBPDP49716 269 aaPredicted RBP13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 GNG3P63215 75 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 GCNT2Q8N0V5 402 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 GPR146Q96CH1 333 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 RNF122Q9H9V4 155 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 ABI3Q9P2A4 366 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 SPRR3Q9UBC9 169 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 RNF115Q9Y4L5 304 aa13.23□□□□□ -0.29
TMEM50A-201ENST00000374358 H0Y980 276 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 ZNF16P17020 682 aaPredicted RBP13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 SULT1A1P50225 295 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 HLA-DRB3P79483 266 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 C15orf54Q8N8G6 183 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 DOCK11Q5JSL3 2073 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 WISP2O76076 250 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 IGKV1-39P01597 117 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 IGLV2-14P01704 120 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 IGKV1D-39P04432 117 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 CD59P13987 128 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 PTAFRP25105 342 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 RAB5CP51148 216 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 OR2B8PP59922 312 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 TMEM164Q5U3C3 297 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 RBMS3Q6XE24 437 aaKnown RBP13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 ZNF573Q86YE8 665 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 COMMD1Q8N668 190 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 OR1K1Q8NGR3 316 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 OR51I2Q9H344 312 aa13.22□□□□□ -0.29
TMEM50A-201ENST00000374358 CHD3Q12873 2000 aaKnown RBP13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 TTC28Q96AY4 2481 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 DEGS1O15121 323 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 TFF1P04155 84 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 IAPPP10997 89 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 OR5D13Q8NGL4 314 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 RNASE11Q8TAA1 199 aaKnown RBP13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 BCL2L14Q9BZR8 327 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 OR2J1Q9GZK6 312 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 CACNA1HO95180 2353 aa13.21□□□□□ -0.29
TMEM50A-201ENST00000374358 TNFSF15O95150 251 aa13.21□□□□□ -0.3
TMEM50A-201ENST00000374358 HNF4GQ14541 408 aa13.21□□□□□ -0.3
TMEM50A-201ENST00000374358 H1FOOQ8IZA3 346 aaPredicted RBP13.21□□□□□ -0.3
TMEM50A-201ENST00000374358 PBDC1Q9BVG4 233 aa13.21□□□□□ -0.3
TMEM50A-201ENST00000374358 GPR87Q9BY21 358 aa13.21□□□□□ -0.3
TMEM50A-201ENST00000374358 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 TXNL1O43396 289 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 SERPINE2P07093 398 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 IDH3GP51553 393 aaPredicted RBP13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 RAB5BP61020 215 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 RNPS1Q15287 305 aaKnown RBP13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 HMGN3Q15651 99 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 ADAM5Q6NVV9 412 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 Q6P435 159 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 MDS2Q8NDY4 140 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 CACNG5Q9UF02 275 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 KCNS2Q9ULS6 477 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 CLEC18AA5D8T8 446 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 RBFOX3A6NFN3 312 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 ZNF727A8MUV8 499 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 H0YL77 283 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 CDIPTO14735 213 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 WDR1O75083 606 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 CNOT4O95628 575 aaKnown RBP13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 SLC10A1Q14973 349 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 TESK1Q15569 626 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 SRSF7Q16629 238 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 CLEC18CQ8NCF0 446 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 BCL2L2Q92843 193 aaPredicted RBP13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 RSG1Q9BU20 258 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 EGLN1Q9GZT9 426 aa13.2□□□□□ -0.3
TMEM50A-201ENST00000374358 C1orf196B1AJZ1 125 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 C21orf140B9A014 251 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 HSPA12AO43301 675 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 LYZL6O75951 148 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 OR2H2O95918 312 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 ACAA1P09110 424 aaPredicted RBP13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 IL24Q13007 206 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 SCCPDHQ8NBX0 429 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 RBM7Q9Y580 266 aaKnown RBP13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 MPC1Q9Y5U8 109 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 OR5B21A6NL26 309 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 KIAA1324LA8MWY0 1029 aaPredicted RBP13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 FBXW9Q5XUX1 488 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 THNSL2Q86YJ6 484 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 OR10V1Q8NGI7 309 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 WDYHV1Q96HA8 205 aa13.19□□□□□ -0.3
TMEM50A-201ENST00000374358 MT-ND4LP03901 98 aa13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 CTXN2P0C2S0 81 aa13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 FOLR2P14207 255 aa13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 RPS23P62266 143 aaKnown RBP13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 HES3Q5TGS1 186 aa13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 FAM180AQ6UWF9 173 aa13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 CYB561D1Q8N8Q1 229 aa13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 VSIRQ9H7M9 311 aa13.18□□□□□ -0.3
TMEM50A-201ENST00000374358 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms