RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 WRBO00258 174 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 HS3ST1O14792 307 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 MGST3O14880 152 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 OR8U8P0C7N1 319 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 TMEM33P57088 247 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 KLF3P57682 345 aaPredicted RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 PJVKQ0ZLH3 352 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 Q3ZCU0 254 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 VWA1Q6PCB0 445 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 TMEM108Q6UXF1 575 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF818PQ6ZRF7 136 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 LYZL2Q7Z4W2 148 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 STX12Q86Y82 276 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 SELENOHQ8IZQ5 122 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 SVBPQ8N300 66 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 OR2C3Q8N628 320 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF645Q8N7E2 425 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 SLC35G3Q8N808 338 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 OR10A7Q8NGE5 316 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 Q8TCH9 128 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 SECTM1Q8WVN6 248 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 MRPL24Q96A35 216 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 RRNAD1Q96FB5 475 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 CIB3Q96Q77 187 aaPredicted RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 HSD17B10Q99714 261 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 AIFM2Q9BRQ8 373 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 LRFN3Q9BTN0 628 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 PBDC1Q9BVG4 233 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 UNKLQ9H9P5 680 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 LYRM2Q9NU23 88 aaPredicted RBP7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 OR6C3Q9NZP0 311 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 OR5AC2Q9NZP5 309 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 USP34Q70CQ2 3546 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 CNTRLQ7Z7A1 2325 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 A0A1B0GW64 132 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 RBFOX2O43251 390 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 PITX3O75364 302 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 FAM157CP0CG43 387 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 SPP1P10451 314 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 TNFRSF1AP19438 455 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 WT1P19544 449 aaPredicted RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 IL2RGP31785 369 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 KIR2DS2P43631 304 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 RAB7AP51149 207 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 CAV2P51636 162 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 HBG1P69891 147 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 HBG2P69892 147 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 NKX6-1P78426 367 aaPredicted RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 TAGLNQ01995 201 aaKnown RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 ATXN7L3Q14CW9 347 aaPredicted RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 HERPUD1Q15011 391 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 ATP6V1FQ16864 119 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 PHLDA2Q53GA4 152 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 DMRTC1Q5HYR2 192 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 WDR82Q6UXN9 313 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF561Q8N587 486 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 RBMXL3Q8N7X1 1067 aaKnown RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 OR11L1Q8NGX0 322 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 SUN5Q8TC36 379 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 RDH5Q92781 318 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 LRRC46Q96FV0 321 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 TP53RKQ96S44 253 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 SEC11CQ9BY50 192 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 ERRFI1Q9UJM3 462 aaPredicted RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 JPT1Q9UK76 154 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF835Q9Y2P0 537 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 RBM7Q9Y580 266 aaKnown RBP7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 MED13Q9UHV7 2174 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 MYO7BQ6PIF6 2116 aa7.36□□□□□ -1.23
SNRNP40-202ENST00000373720 IGKV1-6A0A0C4DH72 117 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 LRRC30A6NM36 301 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 MPTX1A8MV57 137 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF705EA8MWA4 302 aaPredicted RBP7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 C16orf97H3BN30 126 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 K7ENP7 123 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 LGALS8O00214 317 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 YPEL1O60688 119 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 RHBDL1O75783 438 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 SNAPINO95295 136 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 FSTL3O95633 263 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 F12P00748 615 aaPredicted RBP7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 HBE1P02100 147 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 GRPP07492 148 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 CD55P08174 381 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 DANCRP0C864 163 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 MUC1P15941 1255 aaPredicted RBP7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 CEACAM6P40199 344 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 ATP5IP56385 69 aaPredicted RBP7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 RPP30P78346 268 aaKnown RBP7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 PEA15Q15121 130 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 TSC22D1Q15714 1073 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 C10orf91Q5T1B1 145 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 RTN4RL2Q86UN3 420 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 C11orf53Q8IXP5 236 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 OR52M1Q8NGK5 317 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 FAM222BQ8WU58 562 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 DYRK2Q92630 601 aa7.35□□□□□ -1.23
SNRNP40-202ENST00000373720 RAB39BQ96DA2 213 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms