RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TMEM65Q6PI78 240 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 HOGA1Q86XE5 327 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 STXBP6Q8NFX7 210 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 IER2Q9BTL4 223 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 OR2H1Q9GZK4 316 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 RCC2Q9P258 522 aaKnown RBP12.45□□□□□ -0.42
LMX1B-202ENST00000373474 SHISA7A6NL88 538 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 CRYABP02511 175 aaKnown RBP12.44□□□□□ -0.42
LMX1B-202ENST00000373474 VSIG10L2P0DP72 767 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 CXCL2P19875 107 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 EWSR1Q01844 656 aaKnown RBP eCLIP12.44□□□□□ -0.42
LMX1B-202ENST00000373474 LYG1Q8N1E2 194 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 GAPTQ8N292 157 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 DEFB123Q8N688 67 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 CHST1O43916 411 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 FSTP19883 344 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 OR1P1Q8NH06 330 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 MRGPRDQ8TDS7 321 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 FOXS1O43638 330 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 PPYP01298 95 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 MMP16P51512 607 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 PSG5Q15238 335 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 DDA1Q9BW61 102 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 GHITMQ9H3K2 345 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 PDE4DIPQ5VU43 2346 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 OOEPA6NGQ2 149 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 NMUP48645 174 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 ZNF83P51522 516 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 ZXDAP98168 799 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 REC114Q7Z4M0 266 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 NRIP2Q9BQI9 281 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 TMEM38BQ9NVV0 291 aa12.44□□□□□ -0.42
LMX1B-202ENST00000373474 ACP1P24666 158 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 ERVFRD-1P60508 538 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 SLC36A1Q7Z2H8 476 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 LINC00596Q86U02 117 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 H1FOOQ8IZA3 346 aaPredicted RBP12.43□□□□□ -0.42
LMX1B-202ENST00000373474 HSPB9Q9BQS6 159 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 CHST5Q9GZS9 411 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 A0A1W2PPC1 479 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 CDS2O95674 445 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 MT-CO3P00414 261 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 VDAC1P21796 283 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 EMP1P54849 157 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 RPS4XP62701 263 aaKnown RBP12.43□□□□□ -0.42
LMX1B-202ENST00000373474 MRPL30Q8TCC3 161 aaKnown RBP12.43□□□□□ -0.42
LMX1B-202ENST00000373474 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 TRBV5-5A0A0J9YX44 114 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 LYPD8Q6UX82 237 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 OR4S2Q8NH73 311 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 PAGE4O60829 102 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 PRSS12P56730 875 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 OR1N2Q8NGR9 330 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 VSTM2AQ8TAG5 236 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 HSD17B10Q99714 261 aaKnown RBP12.43□□□□□ -0.42
LMX1B-202ENST00000373474 LHX9Q9NQ69 397 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 ARID2Q68CP9 1835 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 PITX3O75364 302 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 CD200R1LQ6Q8B3 271 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 HSF4Q9ULV5 492 aa12.43□□□□□ -0.42
LMX1B-202ENST00000373474 TDRD15B5MCY1 1934 aaKnown RBP12.42□□□□□ -0.42
LMX1B-202ENST00000373474 MKRN2OSH3BPM6 223 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 GAL3ST2Q9H3Q3 398 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 TAF1LQ8IZX4 1826 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 DHRS7CA6NNS2 312 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 RPL36A-HNRNPH2H7BZ11 118 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 FAM157CP0CG43 387 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 OR4P4Q8NGL7 312 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 OR2Y1Q8NGV0 311 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 PGLYRP3Q96LB9 341 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 GLRX2Q9NS18 164 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 AMMECR1Q9Y4X0 333 aaPredicted RBP12.42□□□□□ -0.42
LMX1B-202ENST00000373474 LYZL6O75951 148 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 LYZP61626 148 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 IL36GQ9NZH8 169 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 GREB1LQ9C091 1923 aaPredicted RBP12.42□□□□□ -0.42
LMX1B-202ENST00000373474 PMELP40967 661 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 PIGYQ3MUY2 71 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 SPINK14Q6IE38 97 aa12.42□□□□□ -0.42
LMX1B-202ENST00000373474 KCNAB3O43448 404 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 SLC25A34Q6PIV7 304 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 LYZL2Q7Z4W2 148 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 OR1B1Q8NGR6 318 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 SAP30LQ9HAJ7 183 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 CCL28Q9NRJ3 127 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 DOK5Q9P104 306 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 NGFRP08138 427 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 LOC107984156A0A0G2JMH3 177 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 NKX2-6A6NCS4 301 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 GREM1O60565 184 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 ORM2P19652 201 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 SSX8Q7RTT4 187 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 ARL17AQ8IVW1 177 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 PILRAQ9UKJ1 303 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 A0A0B4J293 547 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms