RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 RBM39Q14498 530 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 HLA-DRB5Q30154 266 aa15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 ZNF367Q7RTV3 350 aa15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 LRRTM1Q86UE6 522 aa15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 MGLLQ99685 303 aa15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 B9D2Q9BPU9 175 aa15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 RCC2Q9P258 522 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 DPM3Q9P2X0 92 aa15.32■□□□□ 0.04
TRAPPC3-204ENST00000373166 KIAA2026Q5HYC2 2103 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 LEUTXA8MZ59 168 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 MCRIP1C9JLW8 97 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 ARL6IP5O75915 188 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 IGLV1-47P01700 117 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 SRMP19623 302 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 SSTR5P35346 364 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 GP2P55259 537 aaKnown RBP15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 LTC4SQ16873 150 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 RAB12Q6IQ22 244 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 TMEM104Q8NE00 496 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 OR10A7Q8NGE5 316 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 OR9G1Q8NH87 305 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 FAM46BQ96A09 425 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 LINC00574Q9H8X3 128 aa15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 AMMECR1Q9Y4X0 333 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-204ENST00000373166 TRAV39A0A0B4J263 110 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 NPIPB11E5RHQ5 1161 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 AIPO00170 330 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 GABARAPL2P60520 117 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 EGFEM1PQ0D2K5 195 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 TCTEX1D4Q5JR98 221 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 RFESDQ8TAC1 157 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 DPF1Q92782 380 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 Q96M66 194 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 GPR61Q9BZJ8 451 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 ETAA1Q9NY74 926 aa15.3■□□□□ 0.04
TRAPPC3-204ENST00000373166 BUB1B-PAK6H3BSN5 160 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 JUNBP17275 347 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 GZMHP20718 246 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 HOXD3P31249 432 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 BRS3P32247 399 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 C1orf100Q5SVJ3 147 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 ZNF497Q6ZNH5 498 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 OR6M1Q8NGM8 313 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 CCDC107Q8WV48 283 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 PEX16Q9Y5Y5 336 aa15.29■□□□□ 0.04
TRAPPC3-204ENST00000373166 FUT3P21217 361 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 HTR2CP28335 458 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 DCTN2Q13561 401 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 TPTE2P1Q5T6R2 138 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 CCDC144NLQ6NUI1 221 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 TMEM91Q6ZNR0 172 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 SVOPQ8N4V2 548 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 OR4X2Q8NGF9 303 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 LEAP2Q969E1 77 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 AKR1E2Q96JD6 320 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 TMEM59Q9BXS4 323 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 RAB9BQ9NP90 201 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 ACOT13Q9NPJ3 140 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 TRAPPC2LQ9UL33 140 aa15.28■□□□□ 0.04
TRAPPC3-204ENST00000373166 OOSP1A8MZH6 123 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 J3QR06 171 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 ORC5O43913 435 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 MRPS14O60783 128 aaKnown RBP15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 PDCD6O75340 191 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 CA11O75493 328 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 MT-ND4P03905 459 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 GLAP06280 429 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 MNDAP41218 407 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 GNG10P50151 68 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 UTF1Q5T230 341 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 C6orf183Q5T699 404 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 SLC16A12Q6ZSM3 486 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 C16orf82Q7Z2V1 217 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 KCNG3Q8TAE7 436 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 CAPSLQ8WWF8 208 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 TOMM40LQ969M1 308 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 ARL11Q969Q4 196 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 RPEQ96AT9 228 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 PLGRKTQ9HBL7 147 aa15.27■□□□□ 0.04
TRAPPC3-204ENST00000373166 SDCBPO00560 298 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 SLC22A1O15245 554 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 DENRO43583 198 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 BPNT1O95861 308 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 IGHV3-7P01780 117 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 CALRP27797 417 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 FABP5Q01469 135 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 KHDC1LQ5JSQ8 128 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 NKAPLQ5M9Q1 402 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 TRAT1Q6PIZ9 186 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 NEDD4LQ96PU5 975 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 PSG11Q9UQ72 335 aa15.26■□□□□ 0.03
TRAPPC3-204ENST00000373166 UBE2QL1A1L167 161 aa15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 C15orf65H3BRN8 121 aa15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 SPINT2O43291 252 aa15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 RPS27AP62979 156 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 MADCAM1Q13477 382 aa15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 TMEM30BQ3MIR4 351 aa15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 SYT6Q5T7P8 510 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 SIGIRRQ6IA17 410 aa15.25■□□□□ 0.03
TRAPPC3-204ENST00000373166 OR10K2Q6IF99 312 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms