RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PNLIPP16233 465 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 SLC16A13Q7RTY0 426 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 MDP1Q86V88 176 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 MS4A7Q9GZW8 240 aaPredicted RBP10.08□□□□□ -0.8
VCL-202ENST00000372755 FSCN3Q9NQT6 498 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 A0A1B0GUL6 1792 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 CCL21O00585 134 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 DCAF10Q5QP82 559 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 PKD1L3Q7Z443 1732 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 PRNTQ86SH4 94 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 RAB37Q96AX2 223 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 EID2BQ96D98 161 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 WBP1LQ9NX94 342 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 IL19Q9UHD0 177 aa10.08□□□□□ -0.8
VCL-202ENST00000372755 SF3B6Q9Y3B4 125 aaKnown RBP10.08□□□□□ -0.8
VCL-202ENST00000372755 VSIG8P0DPA2 414 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 IL9P15248 144 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 AESQ08117 197 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 SIGLEC14Q08ET2 396 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 ADIPOQQ15848 244 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 ZNF880Q6PDB4 577 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 RPLP1P05386 114 aaKnown RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 RPL31P62899 125 aaKnown RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 SLC35B1P78383 322 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 MARS2Q96GW9 593 aaKnown RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 OPN4Q9UHM6 478 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 PITPNC1Q9UKF7 332 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 CACNA1SQ13698 1873 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 TMEM189A5PLL7 270 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 UBE2L6O14933 153 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 SMIM6P0DI80 62 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 PRF1P14222 555 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 SPINK2P20155 84 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 NAAAQ02083 359 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 SRSF5Q13243 272 aaKnown RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 KLF9Q13886 244 aaPredicted RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 LGALSLQ3ZCW2 172 aaPredicted RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 OR10J6PQ8NGY7 276 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 PTX4Q96A99 478 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 ZNF714Q96N38 554 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 OR4C12Q96R67 309 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 A0A1W2PS18 150 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 OR4C46A6NHA9 309 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 SS18L1O75177 396 aaPredicted RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 PRDX2P32119 198 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 MMP16P51512 607 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 C1orf53Q5VUE5 145 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 DUSP15Q9H1R2 295 aaPredicted RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 TMSB15BA0A087X1C1 80 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 DHRS7CA6NNS2 312 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 NPIPB6E9PJ23 425 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 RBM11P57052 281 aaKnown RBP10.07□□□□□ -0.8
VCL-202ENST00000372755 TWIST1Q15672 202 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 ISOC2Q96AB3 205 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 UCN2Q96RP3 112 aa10.07□□□□□ -0.8
VCL-202ENST00000372755 TMEM238LA0A1B0GVL6 79 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 A6NJY4 79 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 PRSS23O95084 383 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 MAS1LP35410 378 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 ZNF137PP52743 207 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 ZNF345Q14585 488 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 AMMECR1LQ6DCA0 310 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 ADAD2Q8NCV1 583 aaKnown RBP10.06□□□□□ -0.8
VCL-202ENST00000372755 SCNM1Q9BWG6 230 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 URB1O60287 2271 aaKnown RBP10.06□□□□□ -0.8
VCL-202ENST00000372755 GCSAMQ8N6F7 178 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 ST6GAL2Q96JF0 529 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 TTTY12Q9BZ98 90 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 GAPDHP04406 335 aaKnown RBP10.06□□□□□ -0.8
VCL-202ENST00000372755 RRN3P1Q2M238 152 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 MC5RP33032 325 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 ZFP36L2P47974 494 aaKnown RBP10.06□□□□□ -0.8
VCL-202ENST00000372755 TBX15Q96SF7 602 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 OR2J1Q9GZK6 312 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 RAB33BQ9H082 229 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 ZNF324O75467 553 aaPredicted RBP10.06□□□□□ -0.8
VCL-202ENST00000372755 COX6CP09669 75 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 APELAP0DMC3 54 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 MMP9P14780 707 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 H1FOOQ8IZA3 346 aaPredicted RBP10.06□□□□□ -0.8
VCL-202ENST00000372755 SMDT1Q9H4I9 107 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 NPVFQ9HCQ7 196 aa10.06□□□□□ -0.8
VCL-202ENST00000372755 LEUTXA8MZ59 168 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 CLDN14O95500 239 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 FAM106CPP0CH98 169 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 CEBPDP49716 269 aaPredicted RBP10.05□□□□□ -0.8
VCL-202ENST00000372755 STPG3Q8N7X2 389 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 OR4D11Q8NGI4 311 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 MGST3O14880 152 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 RPL27AP46776 148 aaKnown RBP10.05□□□□□ -0.8
VCL-202ENST00000372755 C9orf62Q8N4C0 152 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 ZP4Q12836 540 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 CLEC2AQ6UVW9 174 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 OR1K1Q8NGR3 316 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 IL17BQ9UHF5 180 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 FAM3BP58499 235 aaPredicted RBP10.05□□□□□ -0.8
VCL-202ENST00000372755 SERF2P84101 59 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 C9orf40Q8IXQ3 194 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms